RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 PLA2R1Q13018 1463 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 MBD5Q9P267 1494 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CDC42BPBQ9Y5S2 1711 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 NCOA1Q15788 1441 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 MIA2Q96PC5 1412 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 CROCC2H7BZ55 1655 aa3.27□□□□□ -1.89
DEPDC4-206ENST00000549100 ADCY10Q96PN6 1610 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 ROBO2Q9HCK4 1378 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 CCER2I3L3R5 266 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 GFRA2O00451 464 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 STK10O94804 968 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 BPNT1O95861 308 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 AFMP43652 599 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 EFEMP1Q12805 493 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 COL9A2Q14055 689 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 KIF4BQ2VIQ3 1234 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 TMEM67Q5HYA8 995 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 ANGEL2Q5VTE6 544 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 SCARA3Q6AZY7 606 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 KCNN1Q92952 543 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 ANAPC16Q96DE5 110 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 KIRREL1Q96J84 757 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 WDR18Q9BV38 432 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 SRRTQ9BXP5 876 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 STRIP2Q9ULQ0 834 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 ZNRF3Q9ULT6 936 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 CORINQ9Y5Q5 1042 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 CSADQ9Y600 493 aa3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 RPRD2Q5VT52 1461 aaKnown RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 TROQ12816 1431 aaPredicted RBP3.26□□□□□ -1.89
DEPDC4-206ENST00000549100 SAMD9LQ8IVG5 1584 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 CHD1O14646 1710 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 SYNJ2O15056 1496 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 DCDC2CA8MYV0 355 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 DNAJA2O60884 412 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 AOC2O75106 756 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 ZNF165P49910 485 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 HNRNPA0Q13151 305 aaKnown RBP3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 ZC3H12AQ5D1E8 599 aaKnown RBP3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 ANKS3Q6ZW76 656 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 C12orf40Q86WS4 652 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 REXO1Q8N1G1 1221 aaKnown RBP3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 HNRNPLLQ8WVV9 542 aaKnown RBP3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 SORCS2Q96PQ0 1159 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 FERD3LQ96RJ6 166 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 PIF1Q9H611 641 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 ANTXR1Q9H6X2 564 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 EHMT1Q9H9B1 1298 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 DCP1AQ9NPI6 582 aaPredicted RBP3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 C19orf73Q9NVV2 129 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 MYRFQ9Y2G1 1151 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 PCDHB14Q9Y5E9 798 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 CNTLNQ9NXG0 1405 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 KDM5CP41229 1560 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 ROCK1Q13464 1354 aa3.25□□□□□ -1.89
DEPDC4-206ENST00000549100 PRR36Q9H6K5 1346 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 ADGBQ8N7X0 1667 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 ADGRL2O95490 1459 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 PRAMEF27A3QJZ7 478 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 SMAD7O15105 426 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 TMPRSS2O15393 492 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 ANP32CO43423 234 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 KLF4O43474 513 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 EIF4EBP3O60516 100 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 ATE1O95260 518 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 HTR3BO95264 441 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 FSHBP01225 129 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 NTF4P34130 210 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 GIPRP48546 466 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 EIF6P56537 245 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 RING1Q06587 406 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 SERINC3Q13530 473 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 MAP7Q14244 749 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 CCDC144BQ3MJ40 725 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 PPM1JQ5JR12 505 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 EXOSC6Q5RKV6 272 aaKnown RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 FBXW10Q5XX13 1052 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 GIMAP6Q6P9H5 292 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 RUFY4Q6ZNE9 571 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 CYFIP1Q7L576 1253 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 SKAP1Q86WV1 359 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 FAM9BQ8IZU0 186 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 CPLX3Q8WVH0 158 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 YIPF2Q9BWQ6 316 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 PRKRIP1Q9H875 184 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 FAM105AQ9NUU6 356 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 CFDP1Q9UEE9 299 aaPredicted RBP3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 PRKAG3Q9UGI9 489 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 PPP1R9AQ9ULJ8 1098 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 SNCAIPQ9Y6H5 919 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 TTC37Q6PGP7 1564 aa3.24□□□□□ -1.89
DEPDC4-206ENST00000549100 ERCC6Q03468 1493 aa3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 MAGI1Q96QZ7 1491 aaPredicted RBP3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 MEIS3P2A8K0S8 358 aa3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 TNFRSF1AP19438 455 aa3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 HNRNPUQ00839 825 aaKnown RBP eCLIP3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 ID3Q02535 119 aa3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 ZP2Q05996 745 aa3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 IFI16Q16666 785 aaKnown RBP3.23□□□□□ -1.89
DEPDC4-206ENST00000549100 SPATS1Q496A3 300 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms