RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
DEPDC4-206ENST00000549100 CHIC1Q5VXU3 224 aa15.02■□□□□ -0
DEPDC4-206ENST00000549100 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
DEPDC4-206ENST00000549100 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
DEPDC4-206ENST00000549100 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
DEPDC4-206ENST00000549100 FOXD1Q16676 465 aa13.15□□□□□ -0.3
DEPDC4-206ENST00000549100 MSH5O43196 834 aa12.43□□□□□ -0.42
DEPDC4-206ENST00000549100 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
DEPDC4-206ENST00000549100 PPP6R1Q9UPN7 881 aa11.78□□□□□ -0.52
DEPDC4-206ENST00000549100 ADRA2BP18089 450 aa11.65□□□□□ -0.54
DEPDC4-206ENST00000549100 PLPPR3Q6T4P5 718 aa11.26□□□□□ -0.61
DEPDC4-206ENST00000549100 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
DEPDC4-206ENST00000549100 MAPK8IP2Q13387 824 aaPredicted RBP10.98□□□□□ -0.65
DEPDC4-206ENST00000549100 DMRT2Q9Y5R5 561 aa10.91□□□□□ -0.66
DEPDC4-206ENST00000549100 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
DEPDC4-206ENST00000549100 DCAF8L1A6NGE4 600 aa10.5□□□□□ -0.73
DEPDC4-206ENST00000549100 POTEHQ6S545 545 aa10.47□□□□□ -0.73
DEPDC4-206ENST00000549100 SCAF1Q9H7N4 1312 aaKnown RBP10.43□□□□□ -0.74
DEPDC4-206ENST00000549100 C1QBPQ07021 282 aaKnown RBP10.35□□□□□ -0.75
DEPDC4-206ENST00000549100 HOXD11P31277 338 aaPredicted RBP10.21□□□□□ -0.77
DEPDC4-206ENST00000549100 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
DEPDC4-206ENST00000549100 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
DEPDC4-206ENST00000549100 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
DEPDC4-206ENST00000549100 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
DEPDC4-206ENST00000549100 DSG3P32926 999 aa9.72□□□□□ -0.85
DEPDC4-206ENST00000549100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.69□□□□□ -0.86
DEPDC4-206ENST00000549100 SPINK5Q9NQ38 1064 aaPredicted RBP9.62□□□□□ -0.87
DEPDC4-206ENST00000549100 CAPN15O75808 1086 aa9.54□□□□□ -0.88
DEPDC4-206ENST00000549100 U3KPZ7 1027 aaPredicted RBP9.48□□□□□ -0.89
DEPDC4-206ENST00000549100 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
DEPDC4-206ENST00000549100 CHRDL2Q6WN34 429 aa9.35□□□□□ -0.91
DEPDC4-206ENST00000549100 ABCB7O75027 752 aa9.33□□□□□ -0.92
DEPDC4-206ENST00000549100 TRHP20396 242 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-206ENST00000549100 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
DEPDC4-206ENST00000549100 NPM3O75607 178 aaKnown RBP9.12□□□□□ -0.95
DEPDC4-206ENST00000549100 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
DEPDC4-206ENST00000549100 ZNF219Q9P2Y4 722 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-206ENST00000549100 HAX1O00165 279 aa9.02□□□□□ -0.97
DEPDC4-206ENST00000549100 EVX2Q03828 476 aa9.01□□□□□ -0.97
DEPDC4-206ENST00000549100 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
DEPDC4-206ENST00000549100 SLC4A2P04920 1241 aa8.97□□□□□ -0.97
DEPDC4-206ENST00000549100 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
DEPDC4-206ENST00000549100 APLP2Q06481 763 aa8.88□□□□□ -0.99
DEPDC4-206ENST00000549100 LHX8Q68G74 356 aa8.85□□□□□ -0.99
DEPDC4-206ENST00000549100 POLA2Q14181 598 aa8.82□□□□□ -1
DEPDC4-206ENST00000549100 AKT1S1Q96B36 256 aa8.82□□□□□ -1
DEPDC4-206ENST00000549100 REM2Q8IYK8 340 aaPredicted RBP8.81□□□□□ -1
DEPDC4-206ENST00000549100 FXR2P51116 673 aaKnown RBP eCLIP8.8□□□□□ -1
DEPDC4-206ENST00000549100 PITPNM1O00562 1244 aa8.74□□□□□ -1.01
DEPDC4-206ENST00000549100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.73□□□□□ -1.01
DEPDC4-206ENST00000549100 HNRNPUL2Q1KMD3 747 aaKnown RBP8.73□□□□□ -1.01
DEPDC4-206ENST00000549100 SAMD1Q6SPF0 538 aaPredicted RBP8.7□□□□□ -1.02
DEPDC4-206ENST00000549100 GABBR2O75899 941 aa8.64□□□□□ -1.03
DEPDC4-206ENST00000549100 OSCARQ8IYS5 282 aa8.57□□□□□ -1.04
DEPDC4-206ENST00000549100 C19orf67A6NJJ6 358 aa8.55□□□□□ -1.04
DEPDC4-206ENST00000549100 POTEIP0CG38 1075 aa8.54□□□□□ -1.04
DEPDC4-206ENST00000549100 PRKAR2AP13861 404 aaKnown RBP8.48□□□□□ -1.05
DEPDC4-206ENST00000549100 ATF5Q9Y2D1 282 aaPredicted RBP8.42□□□□□ -1.06
DEPDC4-206ENST00000549100 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
DEPDC4-206ENST00000549100 POTEMA6NI47 508 aa8.38□□□□□ -1.07
DEPDC4-206ENST00000549100 MYCNP04198 464 aaPredicted RBP8.34□□□□□ -1.07
DEPDC4-206ENST00000549100 POTEGQ6S5H5 508 aa8.32□□□□□ -1.08
DEPDC4-206ENST00000549100 OTUD5Q96G74 571 aa8.32□□□□□ -1.08
DEPDC4-206ENST00000549100 KCNA4P22459 653 aa8.3□□□□□ -1.08
DEPDC4-206ENST00000549100 CHADLQ6NUI6 762 aa8.3□□□□□ -1.08
DEPDC4-206ENST00000549100 CLEC11AQ9Y240 323 aa8.29□□□□□ -1.08
DEPDC4-206ENST00000549100 POTEB2H3BUK9 544 aa8.26□□□□□ -1.09
DEPDC4-206ENST00000549100 SPDYE1Q8NFV5 336 aaPredicted RBP8.19□□□□□ -1.1
DEPDC4-206ENST00000549100 DCBLD2Q96PD2 775 aa8.16□□□□□ -1.1
DEPDC4-206ENST00000549100 CD44P16070 742 aaKnown RBP8.15□□□□□ -1.1
DEPDC4-206ENST00000549100 SPDYE2BA6NHP3 402 aa8.14□□□□□ -1.11
DEPDC4-206ENST00000549100 SPDYE6P0CI01 402 aa8.14□□□□□ -1.11
DEPDC4-206ENST00000549100 SPDYE2Q495Y8 402 aa8.14□□□□□ -1.11
DEPDC4-206ENST00000549100 PCDH10Q9P2E7 1040 aa8.14□□□□□ -1.11
DEPDC4-206ENST00000549100 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-206ENST00000549100 POTEJP0CG39 1038 aa8.02□□□□□ -1.13
DEPDC4-206ENST00000549100 CLCN6P51797 869 aa8.02□□□□□ -1.13
DEPDC4-206ENST00000549100 SSUH2Q9Y2M2 353 aa8.02□□□□□ -1.13
DEPDC4-206ENST00000549100 FARP1Q9Y4F1 1045 aaPredicted RBP8.02□□□□□ -1.13
DEPDC4-206ENST00000549100 GALR2O43603 387 aaPredicted RBP8.01□□□□□ -1.13
DEPDC4-206ENST00000549100 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
DEPDC4-206ENST00000549100 PELP1Q8IZL8 1130 aaKnown RBP7.99□□□□□ -1.13
DEPDC4-206ENST00000549100 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
DEPDC4-206ENST00000549100 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
DEPDC4-206ENST00000549100 FAM163AQ96GL9 167 aaPredicted RBP7.97□□□□□ -1.13
DEPDC4-206ENST00000549100 MKRN4PQ13434 485 aaPredicted RBP7.95□□□□□ -1.14
DEPDC4-206ENST00000549100 ZRANB1Q9UGI0 708 aa7.93□□□□□ -1.14
DEPDC4-206ENST00000549100 FBLN2P98095 1184 aa7.9□□□□□ -1.14
DEPDC4-206ENST00000549100 FOXD4L1Q9NU39 408 aa7.87□□□□□ -1.15
DEPDC4-206ENST00000549100 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
DEPDC4-206ENST00000549100 CDAN1Q8IWY9 1227 aa7.86□□□□□ -1.15
DEPDC4-206ENST00000549100 PHF12Q96QT6 1004 aa7.81□□□□□ -1.16
DEPDC4-206ENST00000549100 METRNQ9UJH8 293 aa7.81□□□□□ -1.16
DEPDC4-206ENST00000549100 MMRN1Q13201 1228 aa7.75□□□□□ -1.17
DEPDC4-206ENST00000549100 MAMSTRQ6ZN01 415 aa7.75□□□□□ -1.17
DEPDC4-206ENST00000549100 ASTLQ6HA08 431 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-206ENST00000549100 ATMINO43313 823 aaPredicted RBP7.72□□□□□ -1.17
DEPDC4-206ENST00000549100 C7P10643 843 aa7.72□□□□□ -1.17
DEPDC4-206ENST00000549100 SLC39A7Q92504 469 aa7.71□□□□□ -1.18
DEPDC4-206ENST00000549100 CREBZFQ9NS37 354 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms