RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SWAP70Q9UH65 585 aa11.48□□□□□ -0.57
C2CD3-220ENST00000544293 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
C2CD3-220ENST00000544293 YBX2Q9Y2T7 364 aaKnown RBP11.48□□□□□ -0.57
C2CD3-220ENST00000544293 ZNF236Q9UL36 1845 aa11.48□□□□□ -0.57
C2CD3-220ENST00000544293 CDK5RAP2Q96SN8 1893 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 GRIN2DO15399 1336 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 ELP1O95163 1332 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 UMODL1Q5DID0 1318 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 MOXD2PA6NHM9 499 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 DCDC2CA8MYV0 355 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 USP17L12C9JPN9 530 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 USP17L21D6R901 530 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 CD4P01730 458 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 BMP1P13497 986 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 PTGS1P23219 599 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 CST5P28325 142 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 NKX3-2P78367 333 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 KCTD2Q14681 263 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 FAM83BQ5T0W9 1011 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 ZKSCAN2Q63HK3 967 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 FAM126BQ8IXS8 530 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 MSL3Q8N5Y2 521 aaKnown RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 NECAB3Q96P71 396 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 NUP88Q99567 741 aaPredicted RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 UPF3AQ9H1J1 476 aaKnown RBP11.47□□□□□ -0.57
C2CD3-220ENST00000544293 FAM184BQ9ULE4 1060 aa11.47□□□□□ -0.57
C2CD3-220ENST00000544293 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 ASTN1O14525 1302 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 ARVCFO00192 962 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 GOLIM4O00461 696 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 DUSP11O75319 330 aaKnown RBP11.46□□□□□ -0.57
C2CD3-220ENST00000544293 ASGR1P07306 291 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 GJA9P57773 515 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 C16orf86Q6ZW13 317 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 SLC43A3Q8NBI5 491 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 HERVK_113Q902F9 699 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 CCDC17Q96LX7 622 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 ARHGEF10LQ9HCE6 1279 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 SMCHD1A6NHR9 2005 aa11.46□□□□□ -0.57
C2CD3-220ENST00000544293 MYO5AQ9Y4I1 1855 aaKnown RBP11.46□□□□□ -0.58
C2CD3-220ENST00000544293 A0A0G2JMZ2 1700 aa11.46□□□□□ -0.58
C2CD3-220ENST00000544293 ZBED9Q6R2W3 1325 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 SYNGAP1Q96PV0 1343 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 MBD4O95243 580 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 CYP2C18P33260 490 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 ADD2P35612 726 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 MRPS5P82675 430 aaKnown RBP11.45□□□□□ -0.58
C2CD3-220ENST00000544293 ACVR2BQ13705 512 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 TMEM63BQ5T3F8 832 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 CTR9Q6PD62 1173 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
C2CD3-220ENST00000544293 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.45□□□□□ -0.58
C2CD3-220ENST00000544293 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 UHRF1Q96T88 793 aaPredicted RBP11.45□□□□□ -0.58
C2CD3-220ENST00000544293 PPP1R12CQ9BZL4 782 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 NKX2-4Q9H2Z4 354 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 KANSL2Q9H9L4 492 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 THEGQ9P2T0 379 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 CNPY2Q9Y2B0 182 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
C2CD3-220ENST00000544293 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
C2CD3-220ENST00000544293 MYOGP15173 224 aa11.44□□□□□ -0.58
C2CD3-220ENST00000544293 PLA2G5P39877 138 aa11.44□□□□□ -0.58
C2CD3-220ENST00000544293 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
C2CD3-220ENST00000544293 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
C2CD3-220ENST00000544293 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 DDX49Q9Y6V7 483 aaKnown RBP11.44□□□□□ -0.58
C2CD3-220ENST00000544293 IGKV6D-41A0A0C4DH26 115 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 F5H6K3 240 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 NDUFB10O96000 172 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 C6orf222P0C671 652 aaPredicted RBP11.43□□□□□ -0.58
C2CD3-220ENST00000544293 RABGGTBP53611 331 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 BEX3Q00994 111 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 TFF2Q03403 129 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 KLRC3Q07444 240 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 SNRNP48Q6IEG0 339 aaKnown RBP11.43□□□□□ -0.58
C2CD3-220ENST00000544293 CCDC129Q6ZRS4 1044 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 GLT1D1Q96MS3 346 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 DNAJC2Q99543 621 aaKnown RBP11.43□□□□□ -0.58
C2CD3-220ENST00000544293 SLF1Q9BQI6 1058 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 PUS7LQ9H0K6 701 aaKnown RBP11.43□□□□□ -0.58
C2CD3-220ENST00000544293 WNT8AQ9H1J5 351 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
C2CD3-220ENST00000544293 GNEQ9Y223 722 aaKnown RBP11.43□□□□□ -0.58
C2CD3-220ENST00000544293 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
C2CD3-220ENST00000544293 RFXAPO00287 272 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 RASA1P20936 1047 aa11.42□□□□□ -0.58
C2CD3-220ENST00000544293 IGFBP4P22692 258 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms