RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ATP6V1E1P36543 226 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ARL1P40616 181 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 FAM102BQ5T8I3 360 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 GPR101Q96P66 508 aaPredicted RBP7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 ALKQ9UM73 1620 aa7.66□□□□□ -1.18
SRGAP1-206ENST00000543397 PRPF6O94906 941 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 SEC24BO95487 1268 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 CYP19A1P11511 503 aaPredicted RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 TNNI1P19237 187 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 PTPN12Q05209 780 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 TBC1D9BQ66K14 1250 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 RSPH3Q86UC2 560 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 CNGA4Q8IV77 575 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 FLCNQ8NFG4 579 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 GTF3C6Q969F1 213 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 TLR7Q9NYK1 1049 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 CDC42BPAQ5VT25 1732 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 H0YCG3 227 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 P4HA1P13674 534 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 ADD2P35612 726 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 PTH1RQ03431 593 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 CCDC186Q7Z3E2 898 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 NELFCDQ8IXH7 590 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 LARSQ9P2J5 1176 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 ZHX1Q9UKY1 873 aaPredicted RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 H7C1W4 665 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 TNFAIP3P21580 790 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT9P35527 623 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 STAT2P52630 851 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 PAK1Q13153 545 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 PI16Q6UXB8 463 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 MAK16Q9BXY0 300 aaKnown RBP7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 IFNKQ9P0W0 207 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 ZMYM6O95789 1325 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 TULP4Q9NRJ4 1543 aa7.65□□□□□ -1.18
SRGAP1-206ENST00000543397 RASGRF1Q13972 1273 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 PPP1R14CQ8TAE6 165 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 BRIP1Q9BX63 1249 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 PCDHB13Q9Y5F0 798 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 ZBTB24O43167 697 aaPredicted RBP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 STAMBPO95630 424 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 POLGP54098 1239 aaPredicted RBP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 KCTD1Q719H9 257 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 NOSTRINQ8IVI9 506 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 SYNE4Q8N205 404 aa7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 IQCGQ9H095 443 aaKnown RBP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 DDX25Q9UHL0 483 aaKnown RBP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 TPX2Q9ULW0 747 aaKnown RBP7.65□□□□□ -1.19
SRGAP1-206ENST00000543397 SSH2Q76I76 1423 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 IQGAP3Q86VI3 1631 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 HOXA2O43364 376 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ECE2O60344 883 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 FMNL1O95466 1100 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MYCP01106 439 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 LIG4P49917 911 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MECOMQ03112 1051 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MAATS1Q7Z4T9 603 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ABI1Q8IZP0 508 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 LEO1Q8WVC0 666 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CDHR1Q96JP9 859 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ANTXR1Q9H6X2 564 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF277Q9NRM2 450 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 SETD1BQ9UPS6 1966 aaKnown RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ABCA9Q8IUA7 1624 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ZEB2O60315 1214 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 OR52Z1P0C646 297 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 NFIXQ14938 502 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 AOC3Q16853 763 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 NAALADL2Q58DX5 795 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 LIN9Q5TKA1 542 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MYSM1Q5VVJ2 828 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 GPBP1Q86WP2 473 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 PDCL2Q8N4E4 241 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MLKLQ8NB16 471 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 PROCA1Q8NCQ7 364 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ATP6V0A1Q93050 837 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 VPS16Q9H269 839 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 RNF17Q9BXT8 1623 aaKnown RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ABL1P00519 1130 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 LCORLQ8N3X6 602 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CHCHD4Q8N4Q1 142 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 MPP4Q96JB8 637 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 JPH2Q9BR39 696 aaPredicted RBP7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 CCDC77Q9BR77 488 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 PPCSQ9HAB8 311 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 SYNRGQ9UMZ2 1314 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 GOLGA6CA6NDK9 693 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 GOLGA6BA6NDN3 693 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 SPOPO43791 374 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 SASH1O94885 1247 aa7.64□□□□□ -1.19
SRGAP1-206ENST00000543397 ZNF202O95125 648 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms