RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 ZSWIM5Q9P217 1185 aa23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 RBBP6Q7Z6E9 1792 aaKnown RBP23.65■■□□□ 1.38
CACNA2D4-215ENST00000542340 ATP2A1O14983 1001 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 GJB1P08034 283 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 CYP21A2P08686 494 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 HOXC6P09630 235 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 EN2P19622 333 aaPredicted RBP23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 STAT2P52630 851 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 KIAA1211Q6ZU35 1233 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 ESYT1Q9BSJ8 1104 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 TEX13BQ9BXU2 312 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 UNC93B1Q9H1C4 597 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 SLC38A10Q9HBR0 1119 aa23.64■■□□□ 1.37
CACNA2D4-215ENST00000542340 ZKSCAN1P17029 563 aaPredicted RBP23.63■■□□□ 1.37
CACNA2D4-215ENST00000542340 ZKSCAN3Q9BRR0 538 aa23.63■■□□□ 1.37
CACNA2D4-215ENST00000542340 PPP4R2Q9NY27 417 aa23.63■■□□□ 1.37
CACNA2D4-215ENST00000542340 ISY1Q9ULR0 285 aaKnown RBP23.63■■□□□ 1.37
CACNA2D4-215ENST00000542340 CTDP1Q9Y5B0 961 aaPredicted RBP23.63■■□□□ 1.37
CACNA2D4-215ENST00000542340 ADORA2AP29274 412 aa23.62■■□□□ 1.37
CACNA2D4-215ENST00000542340 KCTD1Q719H9 257 aa23.62■■□□□ 1.37
CACNA2D4-215ENST00000542340 ANKS1AQ92625 1134 aa23.62■■□□□ 1.37
CACNA2D4-215ENST00000542340 ZSCAN10Q96SZ4 725 aaPredicted RBP23.62■■□□□ 1.37
CACNA2D4-215ENST00000542340 COL11A1P12107 1806 aaPredicted RBP23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 FCER1AP12319 257 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 OAZ1P54368 228 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 TRDNQ13061 729 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 IKQ13123 557 aaPredicted RBP23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 CCL14Q16627 93 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 SNRNP48Q6IEG0 339 aaKnown RBP23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 DPP9Q86TI2 863 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 CHMP4CQ96CF2 233 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 MTMR7Q9Y216 660 aa23.61■■□□□ 1.37
CACNA2D4-215ENST00000542340 GJA8P48165 433 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 TRIM32Q13049 653 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 MAP3K21Q5TCX8 1036 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 RASGRP2Q7LDG7 609 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 CPXCR1Q8N123 301 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 LSG1Q9H089 658 aaKnown RBP23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 PAK6Q9NQU5 681 aaPredicted RBP23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 SLC5A4Q9NY91 659 aa23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 RBM8AQ9Y5S9 174 aaKnown RBP23.6■■□□□ 1.37
CACNA2D4-215ENST00000542340 RPTORQ8N122 1335 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 PDHBP11177 359 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 CAPN2P17655 700 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 CCDC96Q2M329 555 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 CASC1Q6TDU7 716 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 BTNL9Q6UXG8 535 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 NPLOC4Q8TAT6 608 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 MMP19Q99542 508 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 UBAC1Q9BSL1 405 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 RAVER2Q9HCJ3 691 aaKnown RBP23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 HMX1Q9NP08 348 aaPredicted RBP23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 RIPK3Q9Y572 518 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 ZNF236Q9UL36 1845 aa23.59■■□□□ 1.37
CACNA2D4-215ENST00000542340 COBLO75128 1261 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 CDC45O75419 566 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 SNHG28P0DPA3 235 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 PRKAR2AP13861 404 aaKnown RBP23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 ENAHQ8N8S7 591 aaPredicted RBP23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 KAT14Q9H8E8 782 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 FLRT1Q9NZU1 646 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 PRR12Q9ULL5 1215 aa23.58■■□□□ 1.37
CACNA2D4-215ENST00000542340 TNKSO95271 1327 aa23.58■■□□□ 1.36
CACNA2D4-215ENST00000542340 BRCA2P51587 3418 aa23.58■■□□□ 1.36
CACNA2D4-215ENST00000542340 E7EWF7 191 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 SGPL1O95470 568 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 IGHA2P01877 340 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 CACNB2Q08289 660 aaPredicted RBP23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 KCTD2Q14681 263 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 MFSD14CQ5VZR4 134 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 PNMA1Q8ND90 353 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 U2AF1L4Q8WU68 220 aaKnown RBP23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 TAF6LQ9Y6J9 622 aa23.57■■□□□ 1.36
CACNA2D4-215ENST00000542340 ZNF543Q08ER8 600 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 OLFML2BQ68BL8 750 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 TTBK2Q6IQ55 1244 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 CYB5R4Q7L1T6 521 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 RALYLQ86SE5 291 aaKnown RBP23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 NCOA7Q8NI08 942 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 SHISA4Q96DD7 197 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 DEFB118Q96PH6 123 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 GPCPD1Q9NPB8 672 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 ANO2Q9NQ90 1003 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 FBXO40Q9UH90 709 aa23.56■■□□□ 1.36
CACNA2D4-215ENST00000542340 SLC4A3P48751 1232 aa23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 SEC23AQ15436 765 aa23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 GPATCH4Q5T3I0 446 aaKnown RBP23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 CHST13Q8NET6 341 aa23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 ZNF536O15090 1300 aa23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 FRMPD2Q68DX3 1309 aaPredicted RBP23.55■■□□□ 1.36
CACNA2D4-215ENST00000542340 SLC16A2P36021 539 aa23.54■■□□□ 1.36
CACNA2D4-215ENST00000542340 NECTIN1Q15223 517 aa23.54■■□□□ 1.36
CACNA2D4-215ENST00000542340 SYDE2Q5VT97 1194 aa23.54■■□□□ 1.36
CACNA2D4-215ENST00000542340 STOX1Q6ZVD7 989 aa23.54■■□□□ 1.36
CACNA2D4-215ENST00000542340 CRISPLD2Q9H0B8 497 aa23.54■■□□□ 1.36
CACNA2D4-215ENST00000542340 ZNF792Q3KQV3 632 aa23.53■■□□□ 1.36
CACNA2D4-215ENST00000542340 TKFCQ3LXA3 575 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms