RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 PTGS1P23219 599 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 TXNRD1Q16881 649 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 CCDC152Q4G0S7 254 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 CCDC102BQ68D86 513 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 SLC30A9Q6PML9 568 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 POTEAQ6S8J7 498 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
CDH3-203ENST00000542274 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 SLC7A5P2Q9GIP4 190 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 TFIP11Q9UBB9 837 aaKnown RBP12.45□□□□□ -0.42
CDH3-203ENST00000542274 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
CDH3-203ENST00000542274 AHCYL1O43865 530 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 TBC1D8O95759 1140 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 FGAP02671 866 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 TMED1Q13445 227 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 SLC35B4Q969S0 331 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 MPHOSPH8Q99549 860 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 DSCC1Q9BVC3 393 aa12.45□□□□□ -0.42
CDH3-203ENST00000542274 GPAA1O43292 621 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 APBA3O96018 575 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 FESP07332 822 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 SLC8A3P57103 927 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 KRT32Q14532 448 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 Q4G0T1 1027 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 SMUG1Q53HV7 270 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 LSM14AQ8ND56 463 aaKnown RBP12.44□□□□□ -0.42
CDH3-203ENST00000542274 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 WWC3Q9ULE0 1092 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 PCDHGC5Q9Y5F6 944 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 LRP5O75197 1615 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 MBD3O95983 291 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 BDNFP23560 247 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
CDH3-203ENST00000542274 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 COL24A1Q17RW2 1714 aa12.44□□□□□ -0.42
CDH3-203ENST00000542274 DYTNA2CJ06 578 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 CTDNEP1O95476 244 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 CLCN2P51788 898 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 GUCY1B3Q02153 619 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 NFIXQ14938 502 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 KIF4BQ2VIQ3 1234 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 ISM2Q6H9L7 571 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
CDH3-203ENST00000542274 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 TTC6Q86TZ1 520 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 VPS18Q9P253 973 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 DNAI1Q9UI46 699 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 CREB3O43889 395 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 RNF8O76064 485 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 PACS1Q6VY07 963 aa12.43□□□□□ -0.42
CDH3-203ENST00000542274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.43□□□□□ -0.42
CDH3-203ENST00000542274 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
CDH3-203ENST00000542274 TNRC6CQ9HCJ0 1690 aaKnown RBP12.43□□□□□ -0.42
CDH3-203ENST00000542274 H3BQF6 201 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 LRMPQ12912 555 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 TLDC1Q6P9B6 456 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 SYCP3Q8IZU3 236 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 BHMTQ93088 406 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 CORO1BQ9BR76 489 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 MAGEC2Q9UBF1 373 aaPredicted RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 BCAMP50895 628 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 APPBP2Q92624 585 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 CUL5Q93034 780 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDH3-203ENST00000542274 ZCWPW1Q9H0M4 648 aa12.42□□□□□ -0.42
CDH3-203ENST00000542274 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
CDH3-203ENST00000542274 MBD4O95243 580 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
CDH3-203ENST00000542274 POSTNQ15063 836 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
CDH3-203ENST00000542274 STK11IPQ8N1F8 1099 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 TMEM87AQ8NBN3 555 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 BICD2Q8TD16 824 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 ZNF532Q9HCE3 1301 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 ABL1P00519 1130 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 ADD2P35612 726 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
CDH3-203ENST00000542274 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 MYBPC3Q14896 1274 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 SLC27A3Q5K4L6 730 aa12.41□□□□□ -0.42
CDH3-203ENST00000542274 CAPRIN2Q6IMN6 1127 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms