RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 SEPT2Q15019 361 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
LDHA-220ENST00000542179 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
LDHA-220ENST00000542179 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 UTRNP46939 3433 aa10.7□□□□□ -0.7
LDHA-220ENST00000542179 GOLGA6L22H0YM25 854 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 PPFIA3O75145 1194 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 GDF11O95390 407 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 GH2P01242 217 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 JAG1P78504 1218 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 AKAP17AQ02040 695 aaKnown RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 ICA1Q05084 483 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 RESTQ13127 1097 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 PKN1Q16512 942 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 ASPRV1Q53RT3 343 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 MIGA2Q7L4E1 593 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 FAM177A1Q8N128 213 aaPredicted RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 CMTR1Q8N1G2 835 aaKnown RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 STAG2Q8N3U4 1231 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 SPZ1Q9BXG8 430 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 GGA3Q9NZ52 723 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 ZNF112Q9UJU3 913 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 ZBTB21Q9ULJ3 1066 aa10.69□□□□□ -0.7
LDHA-220ENST00000542179 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
LDHA-220ENST00000542179 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 USP17L5A8MUK1 530 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 KLRF2D3W0D1 207 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 CTNND1O60716 968 aaKnown RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 ASNSP08243 561 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 XBP1P17861 261 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 TRIM29Q14134 588 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 PFKFB3Q16875 520 aaPredicted RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 SHROOM1Q2M3G4 852 aaPredicted RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 GPATCH4Q5T3I0 446 aaKnown RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 NBPF12Q5TAG4 269 aaPredicted RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 KRT40Q6A162 431 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 ATL3Q6DD88 541 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 CLEC10AQ8IUN9 316 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 LRRC47Q8N1G4 583 aaKnown RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 DCAF4Q8WV16 495 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 GMCL1Q96IK5 515 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 AIFM3Q96NN9 605 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 ZNF341Q9BYN7 854 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 RIOX1Q9H6W3 641 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 TMX2Q9Y320 296 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 SCN4AP35499 1836 aa10.68□□□□□ -0.7
LDHA-220ENST00000542179 GOLGB1Q14789 3259 aaKnown RBP10.68□□□□□ -0.7
LDHA-220ENST00000542179 MYH4Q9Y623 1939 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 GOLGA8CPA6NN73 597 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 F5H6K3 240 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 UBE2Q2LH0YL09 131 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 CYTH3O43739 400 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 SCG2P13521 617 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 EPHX2P34913 555 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 KLRC3Q07444 240 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 SLC35G1Q2M3R5 365 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 SUPT20HL1Q3ZLR7 823 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 USP17L2Q6R6M4 530 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 FERMT3Q86UX7 667 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 DCPSQ96C86 337 aaKnown RBP10.67□□□□□ -0.7
LDHA-220ENST00000542179 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
LDHA-220ENST00000542179 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 SH3GLB2Q9NR46 395 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 WDR90Q96KV7 1748 aa10.67□□□□□ -0.7
LDHA-220ENST00000542179 A0A1W2PRG0 241 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 MMP1P03956 469 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 GOLGA8HP0CJ92 632 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 U2AF2P26368 475 aaKnown RBP eCLIP10.66□□□□□ -0.72e-8■■□□□ 13.2
LDHA-220ENST00000542179 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 GUCY1B3Q02153 619 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 KIF23Q02241 960 aaPredicted RBP10.66□□□□□ -0.7
LDHA-220ENST00000542179 DNM1Q05193 864 aaKnown RBP10.66□□□□□ -0.7
LDHA-220ENST00000542179 SLFN13Q68D06 897 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 OTUD7BQ6GQQ9 843 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 GJB4Q9NTQ9 266 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 SCAF8Q9UPN6 1271 aaKnown RBP10.66□□□□□ -0.7
LDHA-220ENST00000542179 MYH6P13533 1939 aa10.66□□□□□ -0.7
LDHA-220ENST00000542179 POTECB2RU33 542 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 hCG_1984214I3L0E3 225 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 KRT85P78386 507 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.7
LDHA-220ENST00000542179 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 SKOR2Q2VWA4 1001 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 PNMA8AQ86V59 439 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 ZNF713Q8N859 430 aaPredicted RBP10.65□□□□□ -0.7
LDHA-220ENST00000542179 MTMR8Q96EF0 704 aa10.65□□□□□ -0.7
LDHA-220ENST00000542179 RRP36Q96EU6 259 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms