RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 C11orf49Q9H6J7 331 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 RAI14Q9P0K7 980 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 SLC45A1Q9Y2W3 748 aa9.56□□□□□ -0.88
LMO3-226ENST00000541589 LAMA4Q16363 1823 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 A0A0G2JLL6 359 aaPredicted RBP9.55□□□□□ -0.88
LMO3-226ENST00000541589 TNPO2O14787 897 aaKnown RBP9.55□□□□□ -0.88
LMO3-226ENST00000541589 HAND2P61296 217 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 FGD1P98174 961 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 PRRT2Q7Z6L0 340 aaPredicted RBP9.55□□□□□ -0.88
LMO3-226ENST00000541589 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
LMO3-226ENST00000541589 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 LCORLQ8N3X6 602 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 ANKK1Q8NFD2 765 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 BRF1Q92994 677 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 NACAP1Q9BZK3 213 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 ARMT1Q9H993 441 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 OGDHLQ9ULD0 1010 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 MAST2Q6P0Q8 1798 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 PFASO15067 1338 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 SALL1Q9NSC2 1324 aa9.55□□□□□ -0.88
LMO3-226ENST00000541589 MAGEB6P1A0A0J9YX57 407 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 GJB2P29033 226 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 MCM5P33992 734 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 TRDNQ13061 729 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 SKOR2Q2VWA4 1001 aaPredicted RBP9.54□□□□□ -0.88
LMO3-226ENST00000541589 SPTY2D1Q68D10 685 aaPredicted RBP9.54□□□□□ -0.88
LMO3-226ENST00000541589 NAA16Q6N069 864 aaPredicted RBP9.54□□□□□ -0.88
LMO3-226ENST00000541589 MB21D2Q8IYB1 491 aaPredicted RBP9.54□□□□□ -0.88
LMO3-226ENST00000541589 NECAB1Q8N987 351 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 TTC13Q8NBP0 860 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 FAM151AQ8WW52 585 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 GTF3C6Q969F1 213 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 CHMP4CQ96CF2 233 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 NAPBQ9H115 298 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 EPB41L4AQ9HCS5 686 aaPredicted RBP9.54□□□□□ -0.88
LMO3-226ENST00000541589 TMOD2Q9NZR1 351 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 SLC4A4Q9Y6R1 1079 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
LMO3-226ENST00000541589 PRC1O43663 620 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 STX6O43752 255 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 TRAK2O60296 914 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 PFKFB2O60825 505 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 HMGCRP04035 888 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 COL6A1P12109 1028 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 EVCP57679 992 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 CHAF1AQ13111 956 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 FASTKD5Q7L8L6 764 aaKnown RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 TBC1D10CQ8IV04 446 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 TBC1D22AQ8WUA7 517 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 COA7Q96BR5 231 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 FAM161BQ96MY7 647 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 MYH13Q9UKX3 1938 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 DDX60LQ5H9U9 1706 aaKnown RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 SOWAHBA6NEL2 793 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 PDCP20941 246 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 SYT1P21579 422 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 TDO2P48775 406 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 TRIM32Q13049 653 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 STK3Q13188 491 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 MCTP1Q6DN14 999 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 HHIPL2Q6UWX4 724 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 ADGRA1Q86SQ6 560 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 MIGA1Q8NAN2 632 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 NSUN4Q96CB9 384 aaKnown RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 CDX2Q99626 313 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 LRRC2Q9BYS8 371 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 CNNM2Q9H8M5 875 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 HMX1Q9NP08 348 aaPredicted RBP9.53□□□□□ -0.88
LMO3-226ENST00000541589 GJD2Q9UKL4 321 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 AFG3L2Q9Y4W6 797 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 CDH23Q9H251 3354 aa9.53□□□□□ -0.88
LMO3-226ENST00000541589 ATRNL1Q5VV63 1379 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 PHF20L1A8MW92 1017 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 PRKAB2O43741 272 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 PTPRAP18433 802 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 ANTXR2P58335 489 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 MDM2Q00987 491 aaPredicted RBP9.52□□□□□ -0.89
LMO3-226ENST00000541589 MECOMQ03112 1051 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 APOBRQ0VD83 1088 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 SCRN1Q12765 414 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 FAM110CQ1W6H9 321 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 MAP3K21Q5TCX8 1036 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 MAFAQ8NHW3 353 aaPredicted RBP9.52□□□□□ -0.89
LMO3-226ENST00000541589 ZNF384Q8TF68 577 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
LMO3-226ENST00000541589 TATDN2Q93075 761 aa9.52□□□□□ -0.89
LMO3-226ENST00000541589 DOCK3Q8IZD9 2030 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 SMAPO00193 183 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 F13A1P00488 732 aa9.51□□□□□ -0.89
LMO3-226ENST00000541589 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms