RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 NUBP1P53384 320 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 ZP2Q05996 745 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 PTPROQ16827 1216 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 MAPKAPK5Q8IW41 473 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
YBX3-211ENST00000541351 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
YBX3-211ENST00000541351 UPF3AQ9H1J1 476 aaKnown RBP11.61□□□□□ -0.55
YBX3-211ENST00000541351 ABHD16BQ9H3Z7 469 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 SH2D4AQ9H788 454 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 SERPINB13Q9UIV8 391 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 PALD1Q9ULE6 856 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 WDFY4Q6ZS81 3184 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 SPTBN4Q9H254 2564 aa11.61□□□□□ -0.55
YBX3-211ENST00000541351 REV3LO60673 3130 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 NCK2O43639 380 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 LPXNO60711 386 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 TAL1P17542 331 aaPredicted RBP11.6□□□□□ -0.55
YBX3-211ENST00000541351 ITGA7Q13683 1181 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 TIGD5Q53EQ6 642 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 GORABQ5T7V8 394 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 NAA16Q6N069 864 aaPredicted RBP11.6□□□□□ -0.55
YBX3-211ENST00000541351 TATDN1Q6P1N9 297 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 ATG9AQ7Z3C6 839 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 TTC6Q86TZ1 520 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 SLC43A3Q8NBI5 491 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 EDAQ92838 391 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 CRBNQ96SW2 442 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 ZBED2Q9BTP6 218 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 EHD4Q9H223 541 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 AATFQ9NY61 560 aaKnown RBP eCLIP11.6□□□□□ -0.55
YBX3-211ENST00000541351 TNKSO95271 1327 aa11.6□□□□□ -0.55
YBX3-211ENST00000541351 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
YBX3-211ENST00000541351 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 C19orf67A6NJJ6 358 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 PGK2P07205 417 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 PPP4CP60510 307 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 TCF15Q12870 199 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 TTLL4Q14679 1199 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 MAMDC4Q6UXC1 1216 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
YBX3-211ENST00000541351 RIOX2Q8IUF8 465 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 GDPD5Q8WTR4 605 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 DDX11Q96FC9 970 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
YBX3-211ENST00000541351 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 UMODL1Q5DID0 1318 aa11.59□□□□□ -0.55
YBX3-211ENST00000541351 PROB1E7EW31 1015 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
YBX3-211ENST00000541351 NOL8Q76FK4 1167 aaKnown RBP11.58□□□□□ -0.56
YBX3-211ENST00000541351 DEFB128Q7Z7B8 93 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 FBXL6Q8N531 539 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 MAGEB6Q8N7X4 407 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 ACER1Q8TDN7 264 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
YBX3-211ENST00000541351 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
YBX3-211ENST00000541351 USP34Q70CQ2 3546 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 MYADML2A6NDP7 307 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 TMEM221A6NGB7 291 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 M0R296 226 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 B4GALT4O60513 344 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 STAT3P40763 770 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 RFX5P48382 616 aaPredicted RBP11.57□□□□□ -0.56
YBX3-211ENST00000541351 NKX3-2P78367 333 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 TRIM67Q6ZTA4 783 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 SCLYQ96I15 445 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 AP5M1Q9H0R1 490 aa11.57□□□□□ -0.56
YBX3-211ENST00000541351 ADORA1P30542 326 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 IRS1P35568 1242 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 USP5P45974 858 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 CCDC144BQ3MJ40 725 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 IER5LQ5T953 404 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 MCTP2Q6DN12 878 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 EP400NLQ6ZTU2 488 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 ZNF384Q8TF68 577 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 PABPC5Q96DU9 382 aaKnown RBP11.56□□□□□ -0.56
YBX3-211ENST00000541351 AGBL1Q96MI9 1066 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 HMG20BQ9P0W2 317 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 SAP30BPQ9UHR5 308 aaKnown RBP11.56□□□□□ -0.56
YBX3-211ENST00000541351 MUTYHQ9UIF7 546 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 TRPC6Q9Y210 931 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 CACNA1HO95180 2353 aa11.56□□□□□ -0.56
YBX3-211ENST00000541351 H3BQ06 376 aaPredicted RBP11.55□□□□□ -0.56
YBX3-211ENST00000541351 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
YBX3-211ENST00000541351 MPHOSPH10O00566 681 aaKnown RBP11.55□□□□□ -0.56
YBX3-211ENST00000541351 WDR46O15213 610 aaKnown RBP11.55□□□□□ -0.56
YBX3-211ENST00000541351 EFCAB14O75071 495 aa11.55□□□□□ -0.56
YBX3-211ENST00000541351 SNAI1O95863 264 aaPredicted RBP11.55□□□□□ -0.56
YBX3-211ENST00000541351 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
YBX3-211ENST00000541351 ERVK-21P61565 698 aa11.55□□□□□ -0.56
YBX3-211ENST00000541351 TMEM132BQ14DG7 1078 aa11.55□□□□□ -0.56
YBX3-211ENST00000541351 FSCN1Q16658 493 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms