RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TEX13BQ9BXU2 312 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 SLC38A10Q9HBR0 1119 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 IVNS1ABPQ9Y6Y0 642 aa15.44■□□□□ 0.06
LTBR-208ENST00000541005 CCL5P13501 91 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 CYP2B6P20813 491 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 MCCP23508 829 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 STAT3P40763 770 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 OAZ1P54368 228 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 PLS1Q14651 629 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 MAP3K21Q5TCX8 1036 aa15.43■□□□□ 0.06
LTBR-208ENST00000541005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.43■□□□□ 0.06
LTBR-208ENST00000541005 LSG1Q9H089 658 aaKnown RBP15.43■□□□□ 0.06
LTBR-208ENST00000541005 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
LTBR-208ENST00000541005 TMEM232C9JQI7 657 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 IGHA2P01877 340 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 GJB1P08034 283 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 SNHG28P0DPA3 235 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 PDHBP11177 359 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 WDR78Q5VTH9 848 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 BTNL9Q6UXG8 535 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 KIAA1211Q6ZU35 1233 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 RASGRP2Q7LDG7 609 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 CHURC1Q8WUH1 139 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 KIFC2Q96AC6 838 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 ZSCAN10Q96SZ4 725 aaPredicted RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 PAK6Q9NQU5 681 aaPredicted RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 ZSWIM5Q9P217 1185 aa15.42■□□□□ 0.06
LTBR-208ENST00000541005 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 BAZ2BQ9UIF8 2168 aaKnown RBP15.42■□□□□ 0.06
LTBR-208ENST00000541005 ZBED4O75132 1171 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 CDC45O75419 566 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
LTBR-208ENST00000541005 CAPN2P17655 700 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 ADORA2AP29274 412 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 MLLT1Q03111 559 aaPredicted RBP15.41■□□□□ 0.06
LTBR-208ENST00000541005 KCTD1Q719H9 257 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 NCAPG2Q86XI2 1143 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 ENAHQ8N8S7 591 aaPredicted RBP15.41■□□□□ 0.06
LTBR-208ENST00000541005 UNC93B1Q9H1C4 597 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 TNKSO95271 1327 aa15.41■□□□□ 0.06
LTBR-208ENST00000541005 FCER1AP12319 257 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 GJA8P48165 433 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 TRDNQ13061 729 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 CCL14Q16627 93 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 SNRNP48Q6IEG0 339 aaKnown RBP15.4■□□□□ 0.06
LTBR-208ENST00000541005 STOX1Q6ZVD7 989 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 SHISA4Q96DD7 197 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 UBAC1Q9BSL1 405 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 RNF208Q9H0X6 261 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 TAF6LQ9Y6J9 622 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 TNRC18O15417 2968 aaPredicted RBP15.4■□□□□ 0.06
LTBR-208ENST00000541005 ZNF536O15090 1300 aa15.4■□□□□ 0.06
LTBR-208ENST00000541005 ALPK3Q96L96 1907 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 E7EWF7 191 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 MYCP01106 439 aaPredicted RBP15.39■□□□□ 0.05
LTBR-208ENST00000541005 EN2P19622 333 aaPredicted RBP15.39■□□□□ 0.05
LTBR-208ENST00000541005 ZNF543Q08ER8 600 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 TRIM32Q13049 653 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 SEC23AQ15436 765 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 OLFML2BQ68BL8 750 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 CYB5R4Q7L1T6 521 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.39■□□□□ 0.054e-6■■■■□ 20.6
LTBR-208ENST00000541005 SLC5A4Q9NY91 659 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 PRR12Q9ULL5 1215 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 CEP290O15078 2479 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 RPTORQ8N122 1335 aa15.39■□□□□ 0.05
LTBR-208ENST00000541005 COBLO75128 1261 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 IKQ13123 557 aaPredicted RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 NECTIN1Q15223 517 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 PNMA1Q8ND90 353 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 CHST13Q8NET6 341 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 MMP19Q99542 508 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 CRISPLD2Q9H0B8 497 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 RANBP17Q9H2T7 1088 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 RAVER2Q9HCJ3 691 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 FLRT1Q9NZU1 646 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 DIS3Q9Y2L1 958 aaKnown RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 RIPK3Q9Y572 518 aa15.38■□□□□ 0.05
LTBR-208ENST00000541005 CTDP1Q9Y5B0 961 aaPredicted RBP15.38■□□□□ 0.05
LTBR-208ENST00000541005 DNAJC25-GNG10A0A024R161 153 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 KCTD2Q14681 263 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 TKFCQ3LXA3 575 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 SYDE2Q5VT97 1194 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 MFSD14CQ5VZR4 134 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 TTBK2Q6IQ55 1244 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
LTBR-208ENST00000541005 DPP9Q86TI2 863 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms