RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 FAM184BQ9ULE4 1060 aa32.18■■■□□ 2.74
CHFR-218ENST00000540963 SLC4A4Q9Y6R1 1079 aa32.18■■■□□ 2.74
CHFR-218ENST00000540963 HSFX4A0A1B0GTS1 333 aaPredicted RBP32.17■■■□□ 2.74
CHFR-218ENST00000540963 HSFX3A0A1B0GWH4 333 aaPredicted RBP32.17■■■□□ 2.74
CHFR-218ENST00000540963 ACLYP53396 1101 aa32.17■■■□□ 2.74
CHFR-218ENST00000540963 FAAP100Q0VG06 881 aa32.17■■■□□ 2.74
CHFR-218ENST00000540963 ZNF467Q7Z7K2 595 aaPredicted RBP32.17■■■□□ 2.74
CHFR-218ENST00000540963 SIRT2Q8IXJ6 389 aa32.17■■■□□ 2.74
CHFR-218ENST00000540963 KLHDC9Q8NEP7 349 aa32.17■■■□□ 2.74
CHFR-218ENST00000540963 SYMPKQ92797 1274 aaKnown RBP32.17■■■□□ 2.74
CHFR-218ENST00000540963 STARD7Q9NQZ5 370 aa32.17■■■□□ 2.74
CHFR-218ENST00000540963 SLF1Q9BQI6 1058 aa32.16■■■□□ 2.74
CHFR-218ENST00000540963 ZBTB40Q9NUA8 1239 aa32.16■■■□□ 2.74
CHFR-218ENST00000540963 DDX19BQ9UMR2 479 aa32.16■■■□□ 2.74
CHFR-218ENST00000540963 SYNRGQ9UMZ2 1314 aa32.16■■■□□ 2.74
CHFR-218ENST00000540963 SPTBN5Q9NRC6 3674 aaKnown RBP32.15■■■□□ 2.74
CHFR-218ENST00000540963 DNAJC25-GNG10A0A024R161 153 aa32.15■■■□□ 2.74
CHFR-218ENST00000540963 ATP2A1O14983 1001 aa32.15■■■□□ 2.74
CHFR-218ENST00000540963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.15■■■□□ 2.74
CHFR-218ENST00000540963 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.15■■■□□ 2.74
CHFR-218ENST00000540963 NYAP2Q9P242 653 aa32.15■■■□□ 2.74
CHFR-218ENST00000540963 MROH7Q68CQ1 1323 aa32.15■■■□□ 2.74
CHFR-218ENST00000540963 DUSP11O75319 330 aaKnown RBP32.14■■■□□ 2.74
CHFR-218ENST00000540963 CST5P28325 142 aaPredicted RBP32.14■■■□□ 2.74
CHFR-218ENST00000540963 SBK1Q52WX2 424 aa32.14■■■□□ 2.74
CHFR-218ENST00000540963 CCSAPQ6IQ19 270 aaPredicted RBP32.14■■■□□ 2.74
CHFR-218ENST00000540963 PRPF38AQ8NAV1 312 aaKnown RBP32.14■■■□□ 2.74
CHFR-218ENST00000540963 DDX11Q96FC9 970 aa32.14■■■□□ 2.74
CHFR-218ENST00000540963 CHMP4BQ9H444 224 aaKnown RBP32.14■■■□□ 2.74
CHFR-218ENST00000540963 ELP1O95163 1332 aa32.14■■■□□ 2.74
CHFR-218ENST00000540963 SNAI1O95863 264 aaPredicted RBP32.13■■■□□ 2.73
CHFR-218ENST00000540963 TIMP1P01033 207 aa32.13■■■□□ 2.73
CHFR-218ENST00000540963 SNRNP48Q6IEG0 339 aaKnown RBP32.13■■■□□ 2.73
CHFR-218ENST00000540963 GIMAP6Q6P9H5 292 aa32.13■■■□□ 2.73
CHFR-218ENST00000540963 RAD21O60216 631 aa32.12■■■□□ 2.73
CHFR-218ENST00000540963 DNAJB2P25686 324 aa32.12■■■□□ 2.73
CHFR-218ENST00000540963 LENG1Q96BZ8 264 aaPredicted RBP32.12■■■□□ 2.73
CHFR-218ENST00000540963 PUS7LQ9H0K6 701 aaKnown RBP32.12■■■□□ 2.73
CHFR-218ENST00000540963 TBX21Q9UL17 535 aa32.12■■■□□ 2.73
CHFR-218ENST00000540963 F5H6K3 240 aa32.11■■■□□ 2.73
CHFR-218ENST00000540963 KLRC3Q07444 240 aa32.11■■■□□ 2.73
CHFR-218ENST00000540963 KCNA10Q16322 511 aa32.11■■■□□ 2.73
CHFR-218ENST00000540963 CCDC174Q6PII3 467 aa32.11■■■□□ 2.73
CHFR-218ENST00000540963 PCSK9Q8NBP7 692 aaKnown RBP32.11■■■□□ 2.73
CHFR-218ENST00000540963 GLT1D1Q96MS3 346 aa32.11■■■□□ 2.73
CHFR-218ENST00000540963 MFSD5Q6N075 450 aa32.1■■■□□ 2.73
CHFR-218ENST00000540963 SYNPO2Q9UMS6 1093 aa32.1■■■□□ 2.73
CHFR-218ENST00000540963 MYH4Q9Y623 1939 aa32.1■■■□□ 2.73
CHFR-218ENST00000540963 RASA1P20936 1047 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 CDK7P50613 346 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 ABHD16BQ9H3Z7 469 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 SPC25Q9HBM1 224 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 PRDM6Q9NQX0 595 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 ZHX1Q9UKY1 873 aaPredicted RBP32.09■■■□□ 2.73
CHFR-218ENST00000540963 RIPK3Q9Y572 518 aa32.09■■■□□ 2.73
CHFR-218ENST00000540963 NDUFB10O96000 172 aa32.08■■■□□ 2.73
CHFR-218ENST00000540963 CHGBP05060 677 aa32.08■■■□□ 2.73
CHFR-218ENST00000540963 GRIN2CQ14957 1233 aa32.08■■■□□ 2.73
CHFR-218ENST00000540963 STRBPQ96SI9 672 aaKnown RBP32.08■■■□□ 2.73
CHFR-218ENST00000540963 NUP88Q99567 741 aaPredicted RBP32.08■■■□□ 2.73
CHFR-218ENST00000540963 MKNK2Q9HBH9 465 aa32.08■■■□□ 2.73
CHFR-218ENST00000540963 FBXO40Q9UH90 709 aa32.08■■■□□ 2.73
CHFR-218ENST00000540963 MCM3APO60318 1980 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 ZBED4O75132 1171 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 PPIGQ13427 754 aaKnown RBP eCLIP32.07■■■□□ 2.721e-8■■■■□ 21.7
CHFR-218ENST00000540963 ACVR2BQ13705 512 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 BCL11AQ9H165 835 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 UPF3AQ9H1J1 476 aaKnown RBP32.07■■■□□ 2.72
CHFR-218ENST00000540963 ZNF576Q9H609 170 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 TTC28Q96AY4 2481 aa32.07■■■□□ 2.72
CHFR-218ENST00000540963 OAZ1P54368 228 aa32.06■■■□□ 2.72
CHFR-218ENST00000540963 TIFAQ96CG3 184 aa32.06■■■□□ 2.72
CHFR-218ENST00000540963 BUD13Q9BRD0 619 aaKnown RBP eCLIP32.06■■■□□ 2.72
CHFR-218ENST00000540963 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.06■■■□□ 2.72
CHFR-218ENST00000540963 CTDP1Q9Y5B0 961 aaPredicted RBP32.06■■■□□ 2.72
CHFR-218ENST00000540963 GJA9P57773 515 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 NKX3-2P78367 333 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 CHST13Q8NET6 341 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 MKL1Q969V6 931 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 SLC38A10Q9HBR0 1119 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 ZNF287Q9HBT7 754 aa32.05■■■□□ 2.72
CHFR-218ENST00000540963 IGKV6D-41A0A0C4DH26 115 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 GSG1L2A8MUP6 293 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 C6orf222P0C671 652 aaPredicted RBP32.04■■■□□ 2.72
CHFR-218ENST00000540963 RASIP1Q5U651 963 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 LRRCC1Q9C099 1032 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 FEM1BQ9UK73 627 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 COG6Q9Y2V7 657 aa32.04■■■□□ 2.72
CHFR-218ENST00000540963 A0A0U1RQG5 324 aaPredicted RBP32.03■■■□□ 2.72
CHFR-218ENST00000540963 MYADML2A6NDP7 307 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 ASGR1P07306 291 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 FDX1P10109 184 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 TJAP1Q5JTD0 557 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 CPXCR1Q8N123 301 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 TMEM199Q8N511 208 aa32.03■■■□□ 2.72
CHFR-218ENST00000540963 ARVCFO00192 962 aa32.02■■■□□ 2.72
CHFR-218ENST00000540963 CCDC144BQ3MJ40 725 aa32.02■■■□□ 2.72
CHFR-218ENST00000540963 ANKRD35Q8N283 1001 aa32.02■■■□□ 2.72
CHFR-218ENST00000540963 CLIP2Q9UDT6 1046 aa32.02■■■□□ 2.72
CHFR-218ENST00000540963 TMEM240Q5SV17 173 aa32.01■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms