RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 SLU7O95391 586 aaKnown RBP12.84□□□□□ -0.35
LGR5-203ENST00000540815 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
LGR5-203ENST00000540815 KCNJ6P48051 423 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 DPF2Q92785 391 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 PAGE5Q96GU1 130 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 CDK8P49336 464 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 SYCP1Q15431 976 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
LGR5-203ENST00000540815 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
LGR5-203ENST00000540815 FLT1P17948 1338 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
LGR5-203ENST00000540815 RHBDL3P58872 404 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
LGR5-203ENST00000540815 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 GALNT17Q6IS24 598 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 DAGLBQ8NCG7 672 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.36
LGR5-203ENST00000540815 M0R2N6 131 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 ZNF18P17022 549 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
LGR5-203ENST00000540815 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
LGR5-203ENST00000540815 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.36
LGR5-203ENST00000540815 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.36
LGR5-203ENST00000540815 QSER1Q2KHR3 1735 aa12.83□□□□□ -0.36
LGR5-203ENST00000540815 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 PPEF1O14829 653 aaPredicted RBP12.82□□□□□ -0.36
LGR5-203ENST00000540815 NRDCO43847 1150 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 DPYDQ12882 1025 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 NEDD1Q8NHV4 660 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 ERO1AQ96HE7 468 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 EYA3Q99504 573 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 NFE2L3Q9Y4A8 694 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 MCM7P33993 719 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 BMS1Q14692 1282 aaKnown RBP12.82□□□□□ -0.36
LGR5-203ENST00000540815 E2F4Q16254 413 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 GSDMAQ96QA5 445 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
LGR5-203ENST00000540815 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 CYTH3O43739 400 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 SASH3O75995 380 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 AFMP43652 599 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 IL17AQ16552 155 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 WWC2Q6AWC2 1192 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 BARHL2Q9NY43 387 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 PSDA5PKW4 1024 aaPredicted RBP12.81□□□□□ -0.36
LGR5-203ENST00000540815 STXBP3O00186 592 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
LGR5-203ENST00000540815 IQUBQ8NA54 791 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 MED15Q96RN5 788 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 INTS13Q9NVM9 706 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 PCDHA6Q9UN73 950 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 PCDHA8Q9Y5H6 950 aa12.81□□□□□ -0.36
LGR5-203ENST00000540815 MYO1CO00159 1063 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 NOVP48745 357 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 SLC20A2Q08357 652 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 E4F1Q66K89 784 aaPredicted RBP12.8□□□□□ -0.36
LGR5-203ENST00000540815 FOXR1Q6PIV2 292 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 PLEKHA4Q9H4M7 779 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 ATP6V0A2Q9Y487 856 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 TMEM232C9JQI7 657 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
LGR5-203ENST00000540815 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
LGR5-203ENST00000540815 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 KLRF2D3W0D1 207 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 KIF2AO00139 706 aaPredicted RBP12.8□□□□□ -0.36
LGR5-203ENST00000540815 SMARCA1P28370 1054 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 CUL4BQ13620 913 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 HEATR3Q7Z4Q2 680 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
LGR5-203ENST00000540815 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
LGR5-203ENST00000540815 H2AFXP16104 143 aaPredicted RBP12.79□□□□□ -0.36
LGR5-203ENST00000540815 CASP1P29466 404 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 GTF2IP78347 998 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 TBX2Q13207 712 aaPredicted RBP12.79□□□□□ -0.36
LGR5-203ENST00000540815 RASGRP4Q8TDF6 673 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
LGR5-203ENST00000540815 CPVLQ9H3G5 476 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms