RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ALX1Q15699 326 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 MCMDC2Q4G0Z9 681 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 CHD1LQ86WJ1 897 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 PLXNA1Q9UIW2 1896 aa26.34■■□□□ 1.81
SCARB1-206ENST00000539320 DNM1LO00429 736 aa26.33■■□□□ 1.81
SCARB1-206ENST00000539320 ATP2A1O14983 1001 aa26.33■■□□□ 1.81
SCARB1-206ENST00000539320 BMP3P12645 472 aa26.33■■□□□ 1.81
SCARB1-206ENST00000539320 NMIQ13287 307 aaPredicted RBP26.33■■□□□ 1.81
SCARB1-206ENST00000539320 ISY1Q9ULR0 285 aaKnown RBP26.33■■□□□ 1.81
SCARB1-206ENST00000539320 DIS3Q9Y2L1 958 aaKnown RBP26.33■■□□□ 1.81
SCARB1-206ENST00000539320 IGHDP01880 384 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 NUCB1Q02818 461 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 ZNF792Q3KQV3 632 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 RILPL2Q969X0 211 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 SLC38A10Q9HBR0 1119 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 NRBP1Q9UHY1 535 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 ZMYM6O95789 1325 aa26.32■■□□□ 1.8
SCARB1-206ENST00000539320 A0A1W2PPC1 479 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 ORC4O43929 436 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 LRRC26Q2I0M4 334 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 PRAMEF19Q5SWL8 479 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 ANO1Q5XXA6 986 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 ZNF589Q86UQ0 364 aaPredicted RBP26.31■■□□□ 1.8
SCARB1-206ENST00000539320 CPXCR1Q8N123 301 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 GMCL1Q96IK5 515 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 RAVER2Q9HCJ3 691 aaKnown RBP26.31■■□□□ 1.8
SCARB1-206ENST00000539320 PCDH10Q9P2E7 1040 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 STX8Q9UNK0 236 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 RIPK3Q9Y572 518 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 TACC3Q9Y6A5 838 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 CCDC171Q6TFL3 1326 aa26.31■■□□□ 1.8
SCARB1-206ENST00000539320 RANBP6O60518 1105 aaKnown RBP26.3■■□□□ 1.8
SCARB1-206ENST00000539320 PLEKHM2Q8IWE5 1019 aa26.3■■□□□ 1.8
SCARB1-206ENST00000539320 TINF2Q9BSI4 451 aa26.3■■□□□ 1.8
SCARB1-206ENST00000539320 OSBPL3Q9H4L5 887 aa26.3■■□□□ 1.8
SCARB1-206ENST00000539320 INCENPQ9NQS7 918 aa26.3■■□□□ 1.8
SCARB1-206ENST00000539320 FGAP02671 866 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 HSPD1P10809 573 aaKnown RBP26.29■■□□□ 1.8
SCARB1-206ENST00000539320 SYN1P17600 705 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 SLC1A4P43007 532 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 STAT2P52630 851 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 OAZ1P54368 228 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 ARRDC4Q8NCT1 418 aa26.29■■□□□ 1.8
SCARB1-206ENST00000539320 SENP6Q9GZR1 1112 aaPredicted RBP26.29■■□□□ 1.8
SCARB1-206ENST00000539320 TMEM232C9JQI7 657 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 KBTBD13C9JR72 458 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 NMT2O60551 498 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 FGRP09769 529 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 FDX1P10109 184 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 SLC4A3P48751 1232 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 GJC2Q5T442 439 aaPredicted RBP26.28■■□□□ 1.8
SCARB1-206ENST00000539320 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.28■■□□□ 1.81e-7■□□□□ 8.9
SCARB1-206ENST00000539320 FAM160B2Q86V87 743 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 GDF15Q99988 308 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 IL17RBQ9NRM6 502 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 TOMM22Q9NS69 142 aa26.28■■□□□ 1.8
SCARB1-206ENST00000539320 IKQ13123 557 aaPredicted RBP26.27■■□□□ 1.8
SCARB1-206ENST00000539320 DDX11Q96FC9 970 aa26.27■■□□□ 1.8
SCARB1-206ENST00000539320 FBXO40Q9UH90 709 aa26.27■■□□□ 1.8
SCARB1-206ENST00000539320 MCCP23508 829 aa26.26■■□□□ 1.79
SCARB1-206ENST00000539320 MSL3Q8N5Y2 521 aaKnown RBP26.26■■□□□ 1.79
SCARB1-206ENST00000539320 CHST13Q8NET6 341 aa26.26■■□□□ 1.79
SCARB1-206ENST00000539320 CHURC1Q8WUH1 139 aa26.26■■□□□ 1.79
SCARB1-206ENST00000539320 STAG1Q8WVM7 1258 aa26.26■■□□□ 1.79
SCARB1-206ENST00000539320 DNAJC25-GNG10A0A024R161 153 aa26.25■■□□□ 1.79
SCARB1-206ENST00000539320 SDSP20132 328 aa26.25■■□□□ 1.79
SCARB1-206ENST00000539320 MAGEA10P43363 369 aaPredicted RBP26.25■■□□□ 1.79
SCARB1-206ENST00000539320 NOVP48745 357 aa26.25■■□□□ 1.79
SCARB1-206ENST00000539320 ATN1P54259 1190 aaPredicted RBP26.25■■□□□ 1.79
SCARB1-206ENST00000539320 MFAP1P55081 439 aaKnown RBP26.25■■□□□ 1.79
SCARB1-206ENST00000539320 RRP12Q5JTH9 1297 aaKnown RBP26.25■■□□□ 1.79
SCARB1-206ENST00000539320 CHMP4CQ96CF2 233 aa26.25■■□□□ 1.79
SCARB1-206ENST00000539320 CNPY2Q9Y2B0 182 aa26.25■■□□□ 1.79
SCARB1-206ENST00000539320 SMCHD1A6NHR9 2005 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 SYNGAP1Q96PV0 1343 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 PLA2G6O60733 806 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 MYCNP04198 464 aaPredicted RBP26.24■■□□□ 1.79
SCARB1-206ENST00000539320 RARBP10826 455 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 TAL1P17542 331 aaPredicted RBP26.24■■□□□ 1.79
SCARB1-206ENST00000539320 BMP8BP34820 402 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 HAND2P61296 217 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 LRRC41Q15345 812 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 KCTD1Q719H9 257 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 RASGRP2Q7LDG7 609 aa26.24■■□□□ 1.79
SCARB1-206ENST00000539320 SUPT16HQ9Y5B9 1047 aaKnown RBP26.24■■□□□ 1.79
SCARB1-206ENST00000539320 ZNF865P0CJ78 1059 aaPredicted RBP26.23■■□□□ 1.79
SCARB1-206ENST00000539320 ANKRD35Q8N283 1001 aa26.23■■□□□ 1.79
SCARB1-206ENST00000539320 XPNPEP3Q9NQH7 507 aa26.23■■□□□ 1.79
SCARB1-206ENST00000539320 HOMER2Q9NSB8 354 aa26.23■■□□□ 1.79
SCARB1-206ENST00000539320 DIAPH3Q9NSV4 1193 aa26.23■■□□□ 1.79
SCARB1-206ENST00000539320 MTMR7Q9Y216 660 aa26.23■■□□□ 1.79
SCARB1-206ENST00000539320 AKR1A1P14550 325 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 RTP1P59025 263 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 CCDC96Q2M329 555 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 RCSD1Q6JBY9 416 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 ZNF467Q7Z7K2 595 aaPredicted RBP26.22■■□□□ 1.79
SCARB1-206ENST00000539320 DCAF4Q8WV16 495 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 ACAD9Q9H845 621 aa26.22■■□□□ 1.79
SCARB1-206ENST00000539320 LAMA3Q16787 3333 aa26.21■■□□□ 1.79
SCARB1-206ENST00000539320 ZNF536O15090 1300 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms