RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TREML2Q5T2D2 321 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 FBXO11Q86XK2 927 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 PGBD1Q96JS3 809 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 PLEKHA8P1O95397 391 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 CALM1P0DP23 149 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 CALM2P0DP24 149 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 CALM3P0DP25 149 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 PRPF38AQ8NAV1 312 aaKnown RBP10.08□□□□□ -0.8
GGA3-202ENST00000538886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.87e-10■■□□□ 14.3
GGA3-202ENST00000538886 DNAJC18Q9H819 358 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 RTEL1Q9NZ71 1219 aa10.08□□□□□ -0.8
GGA3-202ENST00000538886 PITPNM2Q9BZ72 1349 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 A0A1W2PRG0 241 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 TESPA1A2RU30 521 aaPredicted RBP10.07□□□□□ -0.8
GGA3-202ENST00000538886 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 SYDE2Q5VT97 1194 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 CHMP5Q9NZZ3 219 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 KCNJ14Q9UNX9 436 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 BTBD19C9JJ37 291 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 RRP1BQ14684 758 aaKnown RBP10.07□□□□□ -0.8
GGA3-202ENST00000538886 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 APOA5Q6Q788 366 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 TEPSINQ96N21 525 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 SNCAIPQ9Y6H5 919 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 COL4A1P02462 1669 aa10.07□□□□□ -0.8
GGA3-202ENST00000538886 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 DDX39AO00148 427 aaKnown RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 JAK2O60674 1132 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 PSMC4P43686 418 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 ALX1Q15699 326 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 ZBTB9Q96C00 473 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 ASCC2Q9H1I8 757 aaPredicted RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 DYNC1I1O14576 645 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 PGK2P07205 417 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 FKBP1BP68106 108 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 JAG1P78504 1218 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 MAP2K1Q02750 393 aaPredicted RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 CDC37Q16543 378 aaPredicted RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 GPATCH4Q5T3I0 446 aaKnown RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 DGKHQ86XP1 1220 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 TSC1Q92574 1164 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 TMX3Q96JJ7 454 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 GBP4Q96PP9 640 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 RREB1Q92766 1687 aa10.06□□□□□ -0.8
GGA3-202ENST00000538886 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
GGA3-202ENST00000538886 EIF2AK2P19525 551 aaKnown RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
GGA3-202ENST00000538886 HERVK_113P62684 666 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 UTP14CQ5TAP6 766 aaKnown RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 GPRC5AQ8NFJ5 357 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 RASGRP4Q8TDF6 673 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 GTPBP4Q9BZE4 634 aaKnown RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 RNF146Q9NTX7 359 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 CNTNAP1P78357 1384 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 IRS2Q9Y4H2 1338 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 ARHGEF16Q5VV41 709 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 RCSD1Q6JBY9 416 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 SEPT14Q6ZU15 432 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 TPCN1Q9ULQ1 816 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 SPDYE5A6NIY4 337 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 GJB2P29033 226 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 GJB4Q9NTQ9 266 aa10.05□□□□□ -0.8
GGA3-202ENST00000538886 DDX49Q9Y6V7 483 aaKnown RBP10.05□□□□□ -0.8
GGA3-202ENST00000538886 TUBGCP6Q96RT7 1819 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 CXCL11O14625 94 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 ORC4O43929 436 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 LBX1P52954 281 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 PPIL2Q13356 520 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 WASF1Q92558 559 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 AIFM3Q96NN9 605 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 EHD4Q9H223 541 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 IL17RBQ9NRM6 502 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 CNPY2Q9Y2B0 182 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 SPEF2Q9C093 1822 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 SH2B2O14492 632 aaPredicted RBP10.04□□□□□ -0.8
GGA3-202ENST00000538886 MCM2P49736 904 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 ANAPC15P60006 121 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 ME3Q16798 604 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
GGA3-202ENST00000538886 TTC14Q96N46 770 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 PSTPIP2Q9H939 334 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 GINS2Q9Y248 185 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 CHMP2AO43633 222 aa10.04□□□□□ -0.8
GGA3-202ENST00000538886 SP3Q02447 781 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms