RNA–Protein interactions for RNA: ENST00000538501.5

PPME1-204, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 744 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-204ENST00000538501 EPHA1P21709 976 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 PPP2R3AQ06190 1150 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 PCDH1Q08174 1060 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 SV2BQ7L1I2 683 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 LRP10Q7Z4F1 713 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
PPME1-204ENST00000538501 BEND7Q8N7W2 519 aaPredicted RBP9.03□□□□□ -0.96
PPME1-204ENST00000538501 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 DNAAF4Q8WXU2 420 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
PPME1-204ENST00000538501 MAP3K2Q9Y2U5 619 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 MAP3K15Q6ZN16 1313 aa9.03□□□□□ -0.96
PPME1-204ENST00000538501 COL15A1P39059 1388 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 UBR2Q8IWV8 1755 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 F6X3S4 739 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 TRIM27P14373 513 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 ARL4DP49703 201 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
PPME1-204ENST00000538501 TSNAXIP1Q2TAA8 658 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
PPME1-204ENST00000538501 METTL22Q9BUU2 404 aaPredicted RBP9.02□□□□□ -0.97
PPME1-204ENST00000538501 NARFQ9UHQ1 456 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
PPME1-204ENST00000538501 ESRRAP11474 423 aaPredicted RBP9.01□□□□□ -0.97
PPME1-204ENST00000538501 RAC1P63000 192 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 ZNF827Q17R98 1081 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 LDLRAD1Q5T700 205 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 ADAMTSL4Q6UY14 1074 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 MYD88Q99836 296 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
PPME1-204ENST00000538501 TTF2Q9UNY4 1162 aaKnown RBP9.01□□□□□ -0.97
PPME1-204ENST00000538501 CAMTA2O94983 1202 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SNRPNP63162 240 aaKnown RBP9□□□□□ -0.97
PPME1-204ENST00000538501 TCIRG1Q13488 830 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SCARA3Q6AZY7 606 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SMIM5Q71RC9 77 aa9□□□□□ -0.97
PPME1-204ENST00000538501 COL23A1Q86Y22 540 aaPredicted RBP9□□□□□ -0.97
PPME1-204ENST00000538501 ITPRIPQ8IWB1 547 aa9□□□□□ -0.97
PPME1-204ENST00000538501 NLGN1Q8N2Q7 840 aa9□□□□□ -0.97
PPME1-204ENST00000538501 TMEM87AQ8NBN3 555 aa9□□□□□ -0.97
PPME1-204ENST00000538501 LINS1Q8NG48 757 aa9□□□□□ -0.97
PPME1-204ENST00000538501 PANK1Q8TE04 598 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SH2B1Q9NRF2 756 aaPredicted RBP9□□□□□ -0.97
PPME1-204ENST00000538501 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
PPME1-204ENST00000538501 SAMM50Q9Y512 469 aa9□□□□□ -0.97
PPME1-204ENST00000538501 ZNF831Q5JPB2 1677 aa9□□□□□ -0.97
PPME1-204ENST00000538501 LY75O60449 1722 aa9□□□□□ -0.97
PPME1-204ENST00000538501 NPHP1O15259 732 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 ALDH1L1O75891 902 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 C19orf57Q0VDD7 668 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 AP3B2Q13367 1082 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 HLFQ16534 295 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 BEND3Q5T5X7 828 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 PPP1R42Q7Z4L9 355 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 TMEM57Q8N5G2 664 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 CCDC191Q8NCU4 936 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 TRIM11Q96F44 468 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 NECAB3Q96P71 396 aaPredicted RBP8.99□□□□□ -0.97
PPME1-204ENST00000538501 C9orf78Q9NZ63 289 aaPredicted RBP8.99□□□□□ -0.97
PPME1-204ENST00000538501 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
PPME1-204ENST00000538501 NIP7Q9Y221 180 aaKnown RBP eCLIP8.99□□□□□ -0.97
PPME1-204ENST00000538501 TNS1Q9HBL0 1735 aaKnown RBP8.99□□□□□ -0.97
PPME1-204ENST00000538501 RNF123Q5XPI4 1314 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 USP42Q9H9J4 1324 aaKnown RBP8.99□□□□□ -0.97
PPME1-204ENST00000538501 ADCY9O60503 1353 aa8.99□□□□□ -0.97
PPME1-204ENST00000538501 C5P01031 1676 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 C4BP0C0L5 1744 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 TJP1Q07157 1748 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 FSCN2O14926 492 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 TCF3P15923 654 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 GPTP24298 496 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 ZNF76P36508 570 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 FANCCQ00597 558 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 PWP1Q13610 501 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 MVPQ14764 893 aaKnown RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 CCDC85BQ15834 202 aaPredicted RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 ZNF423Q2M1K9 1284 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 MEI1Q5TIA1 1274 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 INTS3Q68E01 1043 aaKnown RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 FBXO11Q86XK2 927 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 FMR1NBQ8N0W7 255 aaPredicted RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 IGSF5Q9NSI5 407 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 CWC25Q9NXE8 425 aaPredicted RBP8.98□□□□□ -0.97
PPME1-204ENST00000538501 DDX19BQ9UMR2 479 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 ABCC4O15439 1325 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 PNPLA7Q6ZV29 1317 aa8.98□□□□□ -0.97
PPME1-204ENST00000538501 LAMB4A4D0S4 1761 aa8.97□□□□□ -0.97
PPME1-204ENST00000538501 RGPD3A6NKT7 1758 aaPredicted RBP8.97□□□□□ -0.97
PPME1-204ENST00000538501 RGPD4Q7Z3J3 1758 aa8.97□□□□□ -0.97
PPME1-204ENST00000538501 A0A0A0MRY4 1105 aa8.97□□□□□ -0.97
PPME1-204ENST00000538501 LINC01387J3KSC0 135 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms