RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 AIMP1Q12904 312 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 SUZ12Q15022 739 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 HGSNATQ68CP4 663 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 IGF2-ASQ6U949 168 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 TRMT2AQ8IZ69 625 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 WNT8BQ93098 351 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 FAM161BQ96MY7 647 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 C12orf49Q9H741 205 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 DDX21Q9NR30 783 aaKnown RBP eCLIP5.45□□□□□ -1.541e-323■■■□□ 15.6
SNHG1-208ENST00000538266 SMC4Q9NTJ3 1288 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 PNPLA7Q6ZV29 1317 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 KIF16BQ96L93 1317 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 USP42Q9H9J4 1324 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 SCN7AQ01118 1682 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 C9orf172C9J069 976 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 NPHP1O15259 732 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 DDX3YO15523 660 aaKnown RBP5.44□□□□□ -1.54
SNHG1-208ENST00000538266 ANXA1P04083 346 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 SELPP16109 830 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 GSTT1P30711 240 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF157P51786 506 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-208ENST00000538266 EIF5P55010 431 aaKnown RBP5.44□□□□□ -1.54
SNHG1-208ENST00000538266 DAB2P98082 770 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 GSTM4Q03013 218 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 PROSER3Q2NL68 480 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 SHISA2Q6UWI4 295 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 COL23A1Q86Y22 540 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-208ENST00000538266 RGS22Q8NE09 1264 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 XAGE3Q8WTP9 111 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF576Q9H609 170 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 FAM8A1Q9UBU6 413 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 CACNA1FO60840 1977 aa5.44□□□□□ -1.54
SNHG1-208ENST00000538266 BCORQ6W2J9 1755 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 CASZ1Q86V15 1759 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 SORBS3O60504 671 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 ZBTB7AO95365 584 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF16P17020 682 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-208ENST00000538266 NEXNQ0ZGT2 675 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 ALDH1L2Q3SY69 923 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 RPS26P11Q5JNZ5 115 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-208ENST00000538266 SMIM5Q71RC9 77 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 COPS6Q7L5N1 327 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 TMC4Q7Z404 712 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 AMIGO3Q86WK7 504 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 NLGN1Q8N2Q7 840 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 PLBD2Q8NHP8 589 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 SSH1Q8WYL5 1049 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 NACC1Q96RE7 527 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 MTFR1LQ9H019 292 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 KCNK4Q9NYG8 393 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 SRP68Q9UHB9 627 aaKnown RBP5.43□□□□□ -1.54
SNHG1-208ENST00000538266 NARFQ9UHQ1 456 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 RCAN3Q9UKA8 241 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 PTPRCP08575 1304 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 MAP3K15Q6ZN16 1313 aa5.43□□□□□ -1.54
SNHG1-208ENST00000538266 C1QTNF9BB2RNN3 333 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 ERVV-1B6SEH8 477 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 TM4SF5O14894 197 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 IPO8O15397 1037 aaKnown RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 EIF4EBP3O60516 100 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 CAMTA2O94983 1202 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 USP17L7P0C7H9 530 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 POLD1P28340 1107 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 RARSP54136 660 aaKnown RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 NLRP12P59046 1061 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 NRG1Q02297 640 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 FAAP100Q0VG06 881 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 DUOXA2Q1HG44 320 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 HSP90AB3PQ58FF7 597 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 CLEC4GQ6UXB4 293 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 TTLL7Q6ZT98 887 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 CD163Q86VB7 1156 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 C3orf58Q8NDZ4 430 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 FOXD4L4Q8WXT5 416 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 FRAT1Q92837 279 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 SOX17Q9H6I2 414 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 PHAXQ9H814 394 aaKnown RBP5.42□□□□□ -1.54
SNHG1-208ENST00000538266 SPON1Q9HCB6 807 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 MAP3K2Q9Y2U5 619 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 ARFGEF2Q9Y6D5 1785 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 CARMIL3Q8ND23 1372 aa5.42□□□□□ -1.54
SNHG1-208ENST00000538266 RBM47A0AV96 593 aaKnown RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 PI4KAP2A4QPH2 592 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 B3GALT4O96024 378 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 MMP10P09238 476 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 GYS1P13807 737 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 PPP2R3AQ06190 1150 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 FOXD4L6Q3SYB3 417 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 KSR2Q6VAB6 950 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 FOXD4L3Q6VB84 417 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 G2E3Q7L622 706 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 LRP10Q7Z4F1 713 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 FTSJ3Q8IY81 847 aaKnown RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 TMEM130Q8N3G9 435 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 PI4KAP1Q8N8J0 262 aa5.41□□□□□ -1.54
SNHG1-208ENST00000538266 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 API5Q9BZZ5 524 aaKnown RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 PDGFDQ9GZP0 370 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-208ENST00000538266 MRPL18Q9H0U6 180 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms