RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 KLRF2D3W0D1 207 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
LINC00346-201ENST00000538077 LONRF2Q1L5Z9 754 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 SKA2Q8WVK7 121 aaPredicted RBP12.36□□□□□ -0.43
LINC00346-201ENST00000538077 SLC4A1P02730 911 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 OSBPP22059 807 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 TRIM14Q14142 442 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 NME8Q8N427 588 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 UBE2Q2Q8WVN8 375 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 CLIC6Q96NY7 704 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
LINC00346-201ENST00000538077 SERPINB2P05120 415 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 PPP1R2P41236 205 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 DMP1Q13316 513 aaPredicted RBP12.36□□□□□ -0.43
LINC00346-201ENST00000538077 NAA25Q14CX7 972 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 U2AF2P26368 475 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00346-201ENST00000538077 CCDC127Q96BQ5 260 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 STIM2Q9P246 746 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
LINC00346-201ENST00000538077 TNKSO95271 1327 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 SATB1Q01826 763 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 CFAP57Q96MR6 1250 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 GOLGA6CA6NDK9 693 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 GOLGA6BA6NDN3 693 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 GOLGA6DP0CG33 693 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 PDE6AP16499 860 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 GDAP1L1Q96MZ0 367 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 GOLGA6AQ9NYA3 693 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 LRFN2Q9ULH4 789 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 PCDHA12Q9UN75 941 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ATL3Q6DD88 541 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 HDXQ7Z353 690 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 PEX26Q7Z412 305 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ZBTB33Q86T24 672 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 TTC30AQ86WT1 665 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 DSCC1Q9BVC3 393 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 NFE2L3Q9Y4A8 694 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
LINC00346-201ENST00000538077 ATP5DP30049 168 aa12.35□□□□□ -0.43
LINC00346-201ENST00000538077 PABPC4Q13310 644 aaKnown RBP eCLIP12.34□□□□□ -0.43
LINC00346-201ENST00000538077 MCF2L2Q86YR7 1114 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ACTN4O43707 911 aaKnown RBP12.34□□□□□ -0.43
LINC00346-201ENST00000538077 NOL3O60936 208 aaKnown RBP12.34□□□□□ -0.43
LINC00346-201ENST00000538077 DIXDC1Q155Q3 683 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 RYBPQ8N488 228 aaPredicted RBP12.34□□□□□ -0.43
LINC00346-201ENST00000538077 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 RPS6KC1Q96S38 1066 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ATP5JP18859 108 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 VPS41P49754 854 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 PHLDB2Q86SQ0 1253 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 MARK3P27448 753 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 MORC3Q14149 939 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 KCNJ12Q14500 433 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 KCTD2Q14681 263 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 PI4K2BQ8TCG2 481 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 NUP58Q9BVL2 599 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
LINC00346-201ENST00000538077 MAGEA1P43355 309 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 OSTNP61366 133 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
LINC00346-201ENST00000538077 HOXB7P09629 217 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 PPP2R5AQ15172 486 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 STMN2Q93045 179 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 CARD6Q9BX69 1037 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 BABAM1Q9NWV8 329 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 PRKAG2Q9UGJ0 569 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 GUCY2FP51841 1108 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 SLFN12Q8IYM2 578 aa12.33□□□□□ -0.44
LINC00346-201ENST00000538077 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms