RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 SNAI1O95863 264 aaPredicted RBP12.29□□□□□ -0.44
VPS37C-204ENST00000538036 ADD2P35612 726 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 CDK7P50613 346 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 KCNA10Q16322 511 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 RPAP2Q8IXW5 612 aaPredicted RBP12.29□□□□□ -0.44
VPS37C-204ENST00000538036 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 PRPF38AQ8NAV1 312 aaKnown RBP12.29□□□□□ -0.44
VPS37C-204ENST00000538036 REPS2Q8NFH8 660 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
VPS37C-204ENST00000538036 GAS2L1Q99501 681 aaPredicted RBP12.29□□□□□ -0.44
VPS37C-204ENST00000538036 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 SPC25Q9HBM1 224 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 PAG1Q9NWQ8 432 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 EYSQ5T1H1 3165 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
VPS37C-204ENST00000538036 NAV1Q8NEY1 1877 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 RAB11FIP3O75154 756 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 ATP5JP18859 108 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 FAM83BQ5T0W9 1011 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 RASIP1Q5U651 963 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
VPS37C-204ENST00000538036 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.446e-6■■□□□ 11.7
VPS37C-204ENST00000538036 ABHD16BQ9H3Z7 469 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 SPTBN5Q9NRC6 3674 aaKnown RBP12.28□□□□□ -0.44
VPS37C-204ENST00000538036 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
VPS37C-204ENST00000538036 RAD21O60216 631 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 MS4A1P11836 297 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 ACVR2BQ13705 512 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 TMEM240Q5SV17 173 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
VPS37C-204ENST00000538036 CTR9Q6PD62 1173 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 PSRC1Q6PGN9 363 aaPredicted RBP12.27□□□□□ -0.45
VPS37C-204ENST00000538036 C16orf59Q7L2K0 433 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 HAUS7Q99871 368 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 SEZ6LQ9BYH1 1024 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
VPS37C-204ENST00000538036 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 ARPP21Q9UBL0 812 aaPredicted RBP12.27□□□□□ -0.45
VPS37C-204ENST00000538036 FBXO40Q9UH90 709 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 SLC4A4Q9Y6R1 1079 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
VPS37C-204ENST00000538036 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 A0A0U1RQG5 324 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 F5H6K3 240 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 ARVCFO00192 962 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 TLR3O15455 904 aaKnown RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 ZBED4O75132 1171 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 ASGR1P07306 291 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 C6orf222P0C671 652 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 GJA9P57773 515 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 NKX3-2P78367 333 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 KLRC3Q07444 240 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 RAB30Q15771 203 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 SBK1Q52WX2 424 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 GNASQ5JWF2 1037 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 CCDC129Q6ZRS4 1044 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 VTI1AQ96AJ9 217 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 LENG1Q96BZ8 264 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 PBX4Q9BYU1 374 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 MTIF3Q9H2K0 278 aaKnown RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 MSRAQ9UJ68 235 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 ZHX1Q9UKY1 873 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 SYNPO2Q9UMS6 1093 aa12.26□□□□□ -0.45
VPS37C-204ENST00000538036 CTDP1Q9Y5B0 961 aaPredicted RBP12.26□□□□□ -0.45
VPS37C-204ENST00000538036 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
VPS37C-204ENST00000538036 CDH23Q9H251 3354 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 FDX1P10109 184 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 CSF2RAP15509 400 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 OAZ1P54368 228 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 CCDC144BQ3MJ40 725 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 GIMAP6Q6P9H5 292 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 FAM126BQ8IXS8 530 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 BOLA2Q9H3K6 86 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 ZNF287Q9HBT7 754 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 RIPK3Q9Y572 518 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
VPS37C-204ENST00000538036 SMIM22K7EJ46 135 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 APBB1O00213 710 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 CABYRO75952 493 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 NDUFB10O96000 172 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 COL9A1P20849 921 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 MRPS5P82675 430 aaKnown RBP12.24□□□□□ -0.45
VPS37C-204ENST00000538036 ZNF365Q70YC5 407 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 HERVK_113Q902F9 699 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 MKL1Q969V6 931 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 CHMP4BQ9H444 224 aaKnown RBP12.24□□□□□ -0.45
VPS37C-204ENST00000538036 MKNK2Q9HBH9 465 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
VPS37C-204ENST00000538036 IL23AQ9NPF7 189 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms