RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PLSCR1O15162 318 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 MYBL2P10244 700 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 ADORA1P30542 326 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 CCDC102BQ68D86 513 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 OTUD7BQ6GQQ9 843 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 TMTC1Q8IUR5 882 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 MLKLQ8NB16 471 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 CALR3Q96L12 384 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 SPATS2LQ9NUQ6 558 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 RGL2O15211 777 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 PPP6R2O75170 966 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 ADRA2BP18089 450 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 MARCKSP29966 332 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 SEMA3FQ13275 785 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 AP1ARQ63HQ0 302 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 CNGA4Q8IV77 575 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 EPN3Q9H201 632 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
SEMA4D-221ENST00000537934 GYS1P13807 737 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 ATP5JP18859 108 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 PBX1P40424 430 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 CKAP4Q07065 602 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 PDCLQ13371 301 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 LONRF3Q496Y0 759 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 NAA35Q5VZE5 725 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 RESP18Q5W5W9 173 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 VGLL2Q8N8G2 317 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 MAB21L3Q8N8X9 362 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 ETAA1Q9NY74 926 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 WWC3Q9ULE0 1092 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 LRP5O75197 1615 aa12.71□□□□□ -0.37
SEMA4D-221ENST00000537934 SNAP23O00161 211 aa12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 PSMD14O00487 310 aa12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 TEX33O43247 280 aa12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 ZMYND10O75800 440 aa12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 NBPF9Q3BBW0 867 aa12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 ACTR5Q9H9F9 607 aaPredicted RBP12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.38
SEMA4D-221ENST00000537934 GOLGA6L7A0A1B0GV03 622 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 SLC8A1P32418 973 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 ALS2CLQ60I27 953 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 CYB5D1Q6P9G0 228 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 TPTE2Q6XPS3 522 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 FAM228AQ86W67 206 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 NYXQ9GZU5 481 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 SAMSN1Q9NSI8 373 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 MAN1B1Q9UKM7 699 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 SAR1BQ9Y6B6 198 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 CHGBP05060 677 aa12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 ZNF473Q8WTR7 871 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-221ENST00000537934 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 PDHBP11177 359 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 CASP14P31944 242 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 NAA25Q14CX7 972 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 TTMPQ5BVD1 217 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 PAPD7Q5XG87 772 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 FUKQ8N0W3 1084 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 RFX7Q2KHR2 1363 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 PDE8BO95263 885 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 IBSPP21815 317 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 LSP1P33241 339 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 GCKP35557 465 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 MCMDC2Q4G0Z9 681 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 C6orf89Q6UWU4 347 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 TRMT44Q8IYL2 757 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 RUBCNQ92622 972 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 ITFG2Q969R8 447 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
SEMA4D-221ENST00000537934 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 ERVK-24P63145 666 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 EMC10Q5UCC4 262 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 KDM7AQ6ZMT4 941 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 SND1Q7KZF4 910 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEMA4D-221ENST00000537934 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms