RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 TEX13BQ9BXU2 312 aa18.25■□□□□ 0.51
PAAF1-207ENST00000536003 AAMPQ13685 434 aa18.24■□□□□ 0.51
PAAF1-207ENST00000536003 KIFC2Q96AC6 838 aa18.24■□□□□ 0.51
PAAF1-207ENST00000536003 IL17RBQ9NRM6 502 aa18.24■□□□□ 0.51
PAAF1-207ENST00000536003 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
PAAF1-207ENST00000536003 LTBP2Q14767 1821 aa18.24■□□□□ 0.51
PAAF1-207ENST00000536003 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SLC3A2P08195 630 aaKnown RBP18.23■□□□□ 0.51
PAAF1-207ENST00000536003 KCTD2Q14681 263 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 CHD1LQ86WJ1 897 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 PRPF38AQ8NAV1 312 aaKnown RBP18.23■□□□□ 0.51
PAAF1-207ENST00000536003 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SYNPO2Q9UMS6 1093 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 LCTP09848 1927 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SEPT4O43236 478 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 MSCO60682 206 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 TAL1P17542 331 aaPredicted RBP18.23■□□□□ 0.51
PAAF1-207ENST00000536003 NUCB1Q02818 461 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 ZNF792Q3KQV3 632 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
PAAF1-207ENST00000536003 CPXCR1Q8N123 301 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 SLC5A4Q9NY91 659 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 ANAPC4Q9UJX5 808 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 STX8Q9UNK0 236 aa18.23■□□□□ 0.51
PAAF1-207ENST00000536003 COL6A3P12111 3177 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 MCMDC2Q4G0Z9 681 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
PAAF1-207ENST00000536003 RAVER2Q9HCJ3 691 aaKnown RBP18.22■□□□□ 0.51
PAAF1-207ENST00000536003 LRRC37A2A6NM11 1700 aa18.22■□□□□ 0.51
PAAF1-207ENST00000536003 DNM1LO00429 736 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 ATP2A1O14983 1001 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 FGAP02671 866 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 HSPD1P10809 573 aaKnown RBP18.21■□□□□ 0.51
PAAF1-207ENST00000536003 BMP3P12645 472 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 LENG1Q96BZ8 264 aaPredicted RBP18.21■□□□□ 0.51
PAAF1-207ENST00000536003 GDF15Q99988 308 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 FEM1BQ9UK73 627 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 CCDC171Q6TFL3 1326 aa18.21■□□□□ 0.51
PAAF1-207ENST00000536003 ZMYM6O95789 1325 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 RANBP6O60518 1105 aaKnown RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 COPB2P35606 906 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 ATN1P54259 1190 aaPredicted RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 ALX1Q15699 326 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 TINF2Q9BSI4 451 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 SOX1O00570 391 aaPredicted RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 ORC4O43929 436 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 FGRP09769 529 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 MCCP23508 829 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 HAND2P61296 217 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 FGD4Q96M96 766 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
PAAF1-207ENST00000536003 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
PAAF1-207ENST00000536003 DNAJC25-GNG10A0A024R161 153 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 ZBED4O75132 1171 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
PAAF1-207ENST00000536003 SLC1A4P43007 532 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 STAT2P52630 851 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 KCTD1Q719H9 257 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 TBC1D10CQ8IV04 446 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
PAAF1-207ENST00000536003 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
PAAF1-207ENST00000536003 ZNF536O15090 1300 aa18.18■□□□□ 0.5
PAAF1-207ENST00000536003 ZNF865P0CJ78 1059 aaPredicted RBP18.18■□□□□ 0.5
PAAF1-207ENST00000536003 SDSP20132 328 aa18.18■□□□□ 0.5
PAAF1-207ENST00000536003 NOVP48745 357 aa18.18■□□□□ 0.5
PAAF1-207ENST00000536003 SNAP25P60880 206 aa18.18■□□□□ 0.5
PAAF1-207ENST00000536003 RRP12Q5JTH9 1297 aaKnown RBP18.18■□□□□ 0.5
PAAF1-207ENST00000536003 TOMM22Q9NS69 142 aa18.18■□□□□ 0.5
PAAF1-207ENST00000536003 IRX6P78412 446 aaPredicted RBP18.17■□□□□ 0.5
PAAF1-207ENST00000536003 LRRC41Q15345 812 aa18.17■□□□□ 0.5
PAAF1-207ENST00000536003 NEDD4P46934 1319 aa18.17■□□□□ 0.5
PAAF1-207ENST00000536003 OAZ1P54368 228 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
PAAF1-207ENST00000536003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.16■□□□□ 0.5
PAAF1-207ENST00000536003 AGBL1Q96MI9 1066 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 CTDP1Q9Y5B0 961 aaPredicted RBP18.16■□□□□ 0.5
PAAF1-207ENST00000536003 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 A0A1W2PPC1 479 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 SNAI1O95863 264 aaPredicted RBP18.16■□□□□ 0.5
PAAF1-207ENST00000536003 PGK1P00558 417 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 TICAM2Q86XR7 235 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 STAG1Q8WVM7 1258 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 IL25Q9H293 177 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 XPNPEP3Q9NQH7 507 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
PAAF1-207ENST00000536003 SYNGAP1Q96PV0 1343 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms