RNA–Protein interactions for RNA: ENST00000534242.5

SHARPIN-209, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-209ENST00000534242 MTMR4Q9NYA4 1195 aa27.26■■□□□ 1.95
SHARPIN-209ENST00000534242 ATP2A1O14983 1001 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 PGK1P00558 417 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 AKR1A1P14550 325 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 RNF180Q86T96 592 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 CPXCR1Q8N123 301 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 MSL3Q8N5Y2 521 aaKnown RBP27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 PDLIM7Q9NR12 457 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 SYNPO2Q9UMS6 1093 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 CNPY2Q9Y2B0 182 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 LTBP2Q14767 1821 aa27.25■■□□□ 1.95
SHARPIN-209ENST00000534242 ZBED4O75132 1171 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 TTLL1O95922 423 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 LRRC47Q8N1G4 583 aaKnown RBP27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 KIFC2Q96AC6 838 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 DDX11Q96FC9 970 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 FSD1Q9BTV5 496 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 STXBP5LQ9Y2K9 1186 aa27.24■■□□□ 1.95
SHARPIN-209ENST00000534242 PLIN4Q96Q06 1357 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 PLXNA1Q9UIW2 1896 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 SLC4A3P48751 1232 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 GMCL1P1Q8NEA9 526 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 NEDD1Q8NHV4 660 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 LENG1Q96BZ8 264 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 SLC38A10Q9HBR0 1119 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 FEM1BQ9UK73 627 aa27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 CTDP1Q9Y5B0 961 aaPredicted RBP27.23■■□□□ 1.95
SHARPIN-209ENST00000534242 SYNGAP1Q96PV0 1343 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 DNAH12Q6ZR08 3092 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 DNAJC25-GNG10A0A024R161 153 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 TSPY3P0CV98 308 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 TSPY8P0CW00 308 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 PDE4BQ07343 736 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 ZMYM1Q5SVZ6 1142 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 SH3RF1Q7Z6J0 888 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 BADQ92934 168 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 NAPBQ9H115 298 aa27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 RAVER2Q9HCJ3 691 aaKnown RBP27.22■■□□□ 1.95
SHARPIN-209ENST00000534242 TRIM43BA6NCK2 446 aa27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 ADAMTS4O75173 837 aa27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 SNAI1O95863 264 aaPredicted RBP27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 TLE2Q04725 743 aa27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 PPARAQ07869 468 aa27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 MAMDC4Q6UXC1 1216 aa27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 TRIM43Q96BQ3 446 aaPredicted RBP27.21■■□□□ 1.95
SHARPIN-209ENST00000534242 A0A1W2PQ45 241 aaPredicted RBP27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 A0A1W2PQY0 241 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 SMCHD1A6NHR9 2005 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 POTEB2H3BUK9 544 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 SLC3A2P08195 630 aaKnown RBP27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 MX1P20591 662 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 SLFN13Q68D06 897 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 ZNF467Q7Z7K2 595 aaPredicted RBP27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 MYH4Q9Y623 1939 aa27.2■■□□□ 1.94
SHARPIN-209ENST00000534242 COL6A3P12111 3177 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 BMP3P12645 472 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 OAZ1P54368 228 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 TFAP4Q01664 338 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 SHHQ15465 462 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 FAM109BQ6ICB4 259 aaPredicted RBP27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 ZHX1Q9UKY1 873 aaPredicted RBP27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 FAM184BQ9ULE4 1060 aa27.19■■□□□ 1.94
SHARPIN-209ENST00000534242 SYNRGQ9UMZ2 1314 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 C9orf50Q5SZB4 431 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 ANKRD35Q8N283 1001 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 CHST13Q8NET6 341 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 FBXO40Q9UH90 709 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 TACC3Q9Y6A5 838 aa27.18■■□□□ 1.94
SHARPIN-209ENST00000534242 SALL3Q9BXA9 1300 aa27.17■■□□□ 1.94
SHARPIN-209ENST00000534242 CLTBP09497 229 aa27.17■■□□□ 1.94
SHARPIN-209ENST00000534242 TSEN34Q9BSV6 310 aaKnown RBP27.17■■□□□ 1.94
SHARPIN-209ENST00000534242 TMEM232C9JQI7 657 aa27.16■■□□□ 1.94
SHARPIN-209ENST00000534242 FOXP2O15409 715 aa27.16■■□□□ 1.94
SHARPIN-209ENST00000534242 CCDC129Q6ZRS4 1044 aa27.16■■□□□ 1.94
SHARPIN-209ENST00000534242 FGD4Q96M96 766 aa27.16■■□□□ 1.94
SHARPIN-209ENST00000534242 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.16■■□□□ 1.94
SHARPIN-209ENST00000534242 DLL1O00548 723 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 PQBP1O60828 265 aaKnown RBP27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 FDX1P10109 184 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 ITGB8P26012 769 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 STAT2P52630 851 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 ACLYP53396 1101 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 ACVR2BQ13705 512 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 KLHDC9Q8NEP7 349 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 GUCD1Q96NT3 240 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 STARD7Q9NQZ5 370 aa27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 ISY1Q9ULR0 285 aaKnown RBP27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.15■■□□□ 1.94
SHARPIN-209ENST00000534242 MOXD2PA6NHM9 499 aa27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 DUSP11O75319 330 aaKnown RBP27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 RRP1P56182 461 aaKnown RBP27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 CCSAPQ6IQ19 270 aaPredicted RBP27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 GMCL1Q96IK5 515 aa27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 HOMER2Q9NSB8 354 aa27.14■■□□□ 1.94
SHARPIN-209ENST00000534242 KIAA0355O15063 1070 aa27.13■■□□□ 1.93
SHARPIN-209ENST00000534242 SLC1A4P43007 532 aa27.13■■□□□ 1.93
SHARPIN-209ENST00000534242 PPP4R3BQ5MIZ7 849 aa27.13■■□□□ 1.93
SHARPIN-209ENST00000534242 FAM160B2Q86V87 743 aa27.13■■□□□ 1.93
SHARPIN-209ENST00000534242 NUP133Q8WUM0 1156 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms