RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 ANKRD35Q8N283 1001 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 MSL3Q8N5Y2 521 aaKnown RBP11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 SHISA4Q96DD7 197 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 DSCC1Q9BVC3 393 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.593e-6■■■■■ 37.5
FOXRED1-216ENST00000533839 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
FOXRED1-216ENST00000533839 IRX6P78412 446 aaPredicted RBP11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 TRIM32Q13049 653 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 TRDNQ13061 729 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 LRRC47Q8N1G4 583 aaKnown RBP11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 DCAF4Q8WV16 495 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 KRT23Q9C075 422 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 DDX20Q9UHI6 824 aaKnown RBP11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 MYH7P12883 1935 aa11.33□□□□□ -0.6
FOXRED1-216ENST00000533839 MGAMO43451 1857 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 PLIN4Q96Q06 1357 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 COBLO75128 1261 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 CYP2C19P33261 490 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 HAND2P61296 217 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 CCDC96Q2M329 555 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 TTC22Q5TAA0 569 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 RAVER2Q9HCJ3 691 aaKnown RBP11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 INCENPQ9NQS7 918 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 BAZ2AQ9UIF9 1905 aaKnown RBP11.32□□□□□ -0.6
FOXRED1-216ENST00000533839 PDE4DIPQ5VU43 2346 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 H0YGN5 161 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 SEPT4O43236 478 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 LHX8Q68G74 356 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 MAML3Q96JK9 1138 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 TINF2Q9BSI4 451 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 U3KPZ7 1027 aaPredicted RBP11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 DOCK3Q8IZD9 2030 aa11.31□□□□□ -0.6
FOXRED1-216ENST00000533839 B4DLN1 442 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 FOXP2O15409 715 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 PGK2P07205 417 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 RARBP10826 455 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 NOVP48745 357 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 ZNF792Q3KQV3 632 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 GPATCH4Q5T3I0 446 aaKnown RBP11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 MPHOSPH6Q99547 160 aaKnown RBP11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 ACAD9Q9H845 621 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 KAT14Q9H8E8 782 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 SPC25Q9HBM1 224 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 RAD50Q92878 1312 aa11.3□□□□□ -0.6
FOXRED1-216ENST00000533839 DDX60LQ5H9U9 1706 aaKnown RBP11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 ASB14A6NK59 587 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 NMT2O60551 498 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 CYBAP13498 195 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 BTNL9Q6UXG8 535 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.64e-12■■■■■ 39.7
FOXRED1-216ENST00000533839 RNF180Q86T96 592 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 TRERF1Q96PN7 1200 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 SENP6Q9GZR1 1112 aaPredicted RBP11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 PRKAG2Q9UGJ0 569 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 ZSWIM8A7E2V4 1837 aa11.29□□□□□ -0.6
FOXRED1-216ENST00000533839 ERICH2A1L162 156 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 DNM1LO00429 736 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 KDM4AO75164 1064 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 ALAS1P13196 640 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 AKR1A1P14550 325 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 SART3Q15020 963 aaKnown RBP11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 SYDE2Q5VT97 1194 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 CCDC174Q6PII3 467 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 CENPQQ7L2Z9 268 aaPredicted RBP11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 GPCPD1Q9NPB8 672 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
FOXRED1-216ENST00000533839 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms