RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMTC1Q8IUR5 882 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 CTAGE4Q8IX94 777 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 RBM28Q9NW13 759 aaKnown RBP21.75■■□□□ 1.07
CAPN1-226ENST00000533820 JRKLQ9Y4A0 524 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 FAM205AQ6ZU69 1335 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 ARHGAP25P42331 645 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 ITPK1Q13572 414 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 DNAJC21Q5F1R6 531 aaKnown RBP21.75■■□□□ 1.07
CAPN1-226ENST00000533820 BEND6Q5SZJ8 279 aaPredicted RBP21.75■■□□□ 1.07
CAPN1-226ENST00000533820 CCDC102AQ96A19 550 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 ANAPC4Q9UJX5 808 aa21.75■■□□□ 1.07
CAPN1-226ENST00000533820 TTF2Q9UNY4 1162 aaKnown RBP21.75■■□□□ 1.07
CAPN1-226ENST00000533820 TTC26A0AVF1 554 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 GPS2Q13227 327 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 BRD3Q15059 726 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 CYP26C1Q6V0L0 522 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 COL1A1P02452 1464 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-226ENST00000533820 ITGB4P16144 1822 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 COL4A1P02462 1669 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 PRDX5P30044 214 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 RCAN1P53805 252 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 ZMYND10O75800 440 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 BMP15O95972 392 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 STAG2Q8N3U4 1231 aa21.74■■□□□ 1.07
CAPN1-226ENST00000533820 CELF1Q92879 486 aaKnown RBP21.74■■□□□ 1.07
CAPN1-226ENST00000533820 FAM84BQ96KN1 310 aaPredicted RBP21.74■■□□□ 1.07
CAPN1-226ENST00000533820 GTPBP6O43824 516 aaPredicted RBP21.73■■□□□ 1.07
CAPN1-226ENST00000533820 CCDC172P0C7W6 258 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 MECOMQ03112 1051 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 CPVLQ9H3G5 476 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 LIMA1Q9UHB6 759 aaKnown RBP21.73■■□□□ 1.07
CAPN1-226ENST00000533820 RWDD2AQ9UIY3 292 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 TAF1P21675 1872 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 PARP1P09874 1014 aaKnown RBP21.73■■□□□ 1.07
CAPN1-226ENST00000533820 PPP2R5BQ15173 497 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 ZSCAN26Q16670 478 aa21.73■■□□□ 1.07
CAPN1-226ENST00000533820 EPN1Q9Y6I3 576 aaPredicted RBP21.73■■□□□ 1.07
CAPN1-226ENST00000533820 SKIDA1Q1XH10 827 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 FAM212AQ96EL1 285 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 MTA3Q9BTC8 594 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 LOC102724428A0A0B4J2F2 783 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 USP17L8P0C7I0 530 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 ERCC3P19447 782 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 SIK1P57059 783 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 ZNF658Q5TYW1 1059 aaPredicted RBP21.72■■□□□ 1.07
CAPN1-226ENST00000533820 TXLNBQ8N3L3 684 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 MYO6Q9UM54 1294 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 FAN1Q9Y2M0 1017 aa21.72■■□□□ 1.07
CAPN1-226ENST00000533820 REXO2Q9Y3B8 237 aaKnown RBP21.72■■□□□ 1.07
CAPN1-226ENST00000533820 KLK7P49862 253 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 TRIM47Q96LD4 638 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 PCMTD1Q96MG8 357 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-226ENST00000533820 DCP1AQ9NPI6 582 aaPredicted RBP21.71■■□□□ 1.07
CAPN1-226ENST00000533820 MCM9Q9NXL9 1143 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 CALM1P0DP23 149 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 CALM2P0DP24 149 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 CALM3P0DP25 149 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 HDXQ7Z353 690 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 IRF2BP1Q8IU81 584 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 DYNLL2Q96FJ2 89 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 AK7Q96M32 723 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 TMEM60Q9H2L4 133 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 MAP2K7O14733 419 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 NDUFA10O95299 355 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 INF2Q27J81 1249 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 TYW1BQ6NUM6 668 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 MINPP1Q9UNW1 487 aa21.71■■□□□ 1.07
CAPN1-226ENST00000533820 SEMA3EO15041 775 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 ERLIN1O75477 346 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 PARP10Q53GL7 1025 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 SLC51AQ86UW1 340 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 BRIP1Q9BX63 1249 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 B4DLN1 442 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 DDAH1O94760 285 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 CCDC51Q96ER9 411 aa21.7■■□□□ 1.06
CAPN1-226ENST00000533820 LUC7L2Q9Y383 392 aaKnown RBP21.7■■□□□ 1.06
CAPN1-226ENST00000533820 GOLGA8HP0CJ92 632 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 PFKFB3Q16875 520 aaPredicted RBP21.69■■□□□ 1.06
CAPN1-226ENST00000533820 CCDC122Q5T0U0 273 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 HEATR3Q7Z4Q2 680 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 BLIDQ8IZY5 108 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 L1RE1Q9UN81 338 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 NSUN4Q96CB9 384 aaKnown RBP21.69■■□□□ 1.06
CAPN1-226ENST00000533820 AGPAT5Q9NUQ2 364 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 DOCK2Q92608 1830 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 CCDC194A0A1B0GVG4 234 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 UBA7P41226 1012 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 TFAP4Q01664 338 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 SPAG1Q07617 926 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 CASP8Q14790 479 aa21.69■■□□□ 1.06
CAPN1-226ENST00000533820 ANKRD36CQ5JPF3 1778 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 ATP1A1P05023 1023 aaKnown RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 CYP27A1Q02318 531 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 TSR1Q2NL82 804 aaKnown RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 HPS3Q969F9 1004 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 KAT14Q9H8E8 782 aa21.68■■□□□ 1.06
CAPN1-226ENST00000533820 RRP15Q9Y3B9 282 aaKnown RBP21.68■■□□□ 1.06
CAPN1-226ENST00000533820 DUSP10Q9Y6W6 482 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms