RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 ARHGAP44Q17R89 818 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 UBL4BQ8N7F7 174 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 GSDMAQ96QA5 445 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 TRAPPC10P48553 1259 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 RESTQ13127 1097 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 RPS6KA1Q15418 735 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 CYP2D7A0A087X1C5 515 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 ACTN4O43707 911 aaKnown RBP19.45■□□□□ 0.7
PHRF1-205ENST00000533464 MCAMP43121 646 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 FBF1Q8TES7 1133 aa19.45■□□□□ 0.7
PHRF1-205ENST00000533464 CCDC97Q96F63 343 aaPredicted RBP19.45■□□□□ 0.7
PHRF1-205ENST00000533464 LSM14BQ9BX40 385 aaKnown RBP19.45■□□□□ 0.7
PHRF1-205ENST00000533464 SAR1BQ9Y6B6 198 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 ALKQ9UM73 1620 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 MMP1P03956 469 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 SERPINB2P05120 415 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 HPDP32754 393 aaPredicted RBP19.44■□□□□ 0.7
PHRF1-205ENST00000533464 CFAP221Q4G0U5 840 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 NLRX1Q86UT6 975 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 OTUD6BQ8N6M0 293 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 ZNF215Q9UL58 517 aaPredicted RBP19.44■□□□□ 0.7
PHRF1-205ENST00000533464 NCAPD2Q15021 1401 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 PEX26Q7Z412 305 aa19.44■□□□□ 0.7
PHRF1-205ENST00000533464 ARMCX3Q9UH62 379 aaPredicted RBP19.44■□□□□ 0.7
PHRF1-205ENST00000533464 TMEM232C9JQI7 657 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 LIFRP42702 1097 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 ERCC6LQ2NKX8 1250 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 MCTP2Q6DN12 878 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 CCDC121Q6ZUS5 278 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 PANK4Q9NVE7 773 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 CYP2J2P51589 502 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 LIN9Q5TKA1 542 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 UTP11Q9Y3A2 253 aaKnown RBP19.43■□□□□ 0.7
PHRF1-205ENST00000533464 ZNF335Q9H4Z2 1342 aaPredicted RBP19.43■□□□□ 0.7
PHRF1-205ENST00000533464 COBLO75128 1261 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 ALAS1P13196 640 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 FAM26FQ5R3K3 315 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 SLFN12Q8IYM2 578 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 PCDHA4Q9UN74 947 aa19.43■□□□□ 0.7
PHRF1-205ENST00000533464 AZI2Q9H6S1 392 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 POLR2MP0CAP2 368 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 AFAP1L1Q8TED9 768 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 STRBPQ96SI9 672 aaKnown RBP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 MAK16Q9BXY0 300 aaKnown RBP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 AGTPBP1Q9UPW5 1226 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 FAM170AA1A519 330 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 CALRP27797 417 aaKnown RBP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 ZBTB16Q05516 673 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 C6orf163Q5TEZ5 329 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 DAAM2Q86T65 1068 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 TSKSQ9UJT2 592 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 SNAP23O00161 211 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 USP17L8P0C7I0 530 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 ERCC5P28715 1186 aaPredicted RBP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 ZNF365Q70YC5 407 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 GRAMD1CQ8IYS0 662 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 CCDC63Q8NA47 563 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 CCDC17Q96LX7 622 aa19.42■□□□□ 0.7
PHRF1-205ENST00000533464 SRP68Q9UHB9 627 aaKnown RBP19.42■□□□□ 0.7
PHRF1-205ENST00000533464 TESPA1A2RU30 521 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 ATP2A2P16615 1042 aaKnown RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 STAT1P42224 750 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 TNFAIP1Q13829 316 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 DIXDC1Q155Q3 683 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 PSMD1Q99460 953 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 BBOX1O75936 387 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 CYP4A11Q02928 519 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 SMYD4Q8IYR2 804 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 SYNE4Q8N205 404 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 MICALL1Q8N3F8 863 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 ZNF408Q9H9D4 720 aa19.41■□□□□ 0.7
PHRF1-205ENST00000533464 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 GPATCH4Q5T3I0 446 aaKnown RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 SREK1Q8WXA9 508 aaKnown RBP19.41■□□□□ 0.7
PHRF1-205ENST00000533464 COPB1P53618 953 aaKnown RBP19.4■□□□□ 0.7
PHRF1-205ENST00000533464 SND1Q7KZF4 910 aaKnown RBP eCLIP19.4■□□□□ 0.7
PHRF1-205ENST00000533464 IVNS1ABPQ9Y6Y0 642 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 TICAM2Q86XR7 235 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 SYCE1Q8N0S2 351 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 TRIM58Q8NG06 486 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 LRRC45Q96CN5 670 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GDAP1L1Q96MZ0 367 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GOLGA6CA6NDK9 693 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GOLGA6BA6NDN3 693 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 IKBKBO14920 756 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GOLGA6DP0CG33 693 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 CDC25AP30304 524 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GPR161Q8N6U8 529 aaKnown RBP19.4■□□□□ 0.7
PHRF1-205ENST00000533464 GOLGA6AQ9NYA3 693 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 SLFN14P0C7P3 912 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 DYNLL2Q96FJ2 89 aa19.4■□□□□ 0.7
PHRF1-205ENST00000533464 TRPC5Q9UL62 973 aaPredicted RBP19.4■□□□□ 0.7
PHRF1-205ENST00000533464 ASPRV1Q53RT3 343 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms