RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PRPF38AQ8NAV1 312 aaKnown RBP13.45□□□□□ -0.26
CLCF1-202ENST00000533438 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 MMP19Q99542 508 aa13.45□□□□□ -0.26
CLCF1-202ENST00000533438 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
CLCF1-202ENST00000533438 DIS3Q9Y2L1 958 aaKnown RBP13.45□□□□□ -0.26
CLCF1-202ENST00000533438 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLCF1-202ENST00000533438 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 DNM1LO00429 736 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 SEPT4O43236 478 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 PGK2P07205 417 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TSPY3P0CV98 308 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TSPY8P0CW00 308 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 SYN1P17600 705 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 MAGEA10P43363 369 aaPredicted RBP13.44□□□□□ -0.26
CLCF1-202ENST00000533438 ZNF792Q3KQV3 632 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 SMC5Q8IY18 1101 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TEX13BQ9BXU2 312 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 ANAPC4Q9UJX5 808 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
CLCF1-202ENST00000533438 TFAP4Q01664 338 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 KCTD2Q14681 263 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 ALX1Q15699 326 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 PRAMEF19Q5SWL8 479 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 VPS53Q5VIR6 699 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 SNRNP48Q6IEG0 339 aaKnown RBP13.43□□□□□ -0.26
CLCF1-202ENST00000533438 LRRC47Q8N1G4 583 aaKnown RBP13.43□□□□□ -0.26
CLCF1-202ENST00000533438 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
CLCF1-202ENST00000533438 SLC38A10Q9HBR0 1119 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 FEM1BQ9UK73 627 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 RIPK3Q9Y572 518 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 LTBP2Q14767 1821 aa13.43□□□□□ -0.26
CLCF1-202ENST00000533438 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 FGRP09769 529 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 BMP3P12645 472 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
CLCF1-202ENST00000533438 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 ARRDC4Q8NCT1 418 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 KIFC2Q96AC6 838 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 TINF2Q9BSI4 451 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 IL17RBQ9NRM6 502 aa13.42□□□□□ -0.26
CLCF1-202ENST00000533438 MCM3APO60318 1980 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 TSPY2A6NKD2 308 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 ZBED4O75132 1171 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 IGHDP01880 384 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 NOVP48745 357 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 OAZ1P54368 228 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 SLFN13Q68D06 897 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 GMCL1Q96IK5 515 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
CLCF1-202ENST00000533438 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
CLCF1-202ENST00000533438 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
CLCF1-202ENST00000533438 ZMYM6O95789 1325 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 TMEM232C9JQI7 657 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 ORC4O43929 436 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 NMT2O60551 498 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 FGAP02671 866 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 ZNF865P0CJ78 1059 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-202ENST00000533438 FDX1P10109 184 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 HSPD1P10809 573 aaKnown RBP13.4□□□□□ -0.26
CLCF1-202ENST00000533438 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-202ENST00000533438 STAT2P52630 851 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 LRRC41Q15345 812 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 ZNF589Q86UQ0 364 aaPredicted RBP13.4□□□□□ -0.26
CLCF1-202ENST00000533438 CHD1LQ86WJ1 897 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 CPXCR1Q8N123 301 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
CLCF1-202ENST00000533438 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
CLCF1-202ENST00000533438 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 PLA2G6O60733 806 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 SLC1A4P43007 532 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-202ENST00000533438 NUCB1Q02818 461 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 NMIQ13287 307 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-202ENST00000533438 SNX17Q15036 470 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 SLC39A5Q6ZMH5 540 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 Q7L0L9 218 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
CLCF1-202ENST00000533438 FAM160B2Q86V87 743 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 PLEKHM2Q8IWE5 1019 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 DDX11Q96FC9 970 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 FGD4Q96M96 766 aa13.39□□□□□ -0.27
CLCF1-202ENST00000533438 UBE2OQ9C0C9 1292 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms