RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TRDNQ13061 729 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 MAP2K5Q13163 448 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 PLS1Q14651 629 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 NECTIN1Q15223 517 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 KCTD1Q719H9 257 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 CHURC1Q8WUH1 139 aa24.04■■□□□ 1.44
CCS-208ENST00000533244 BRCA2P51587 3418 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 STRNO43815 780 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 CYP2B6P20813 491 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 RGS2P41220 211 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 WDR78Q5VTH9 848 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 TEX13BQ9BXU2 312 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 CWC22Q9HCG8 908 aaKnown RBP24.03■■□□□ 1.44
CCS-208ENST00000533244 IVNS1ABPQ9Y6Y0 642 aa24.03■■□□□ 1.44
CCS-208ENST00000533244 KIAA0100Q14667 2235 aaKnown RBP24.03■■□□□ 1.44
CCS-208ENST00000533244 ZBED4O75132 1171 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 HOXC6P09630 235 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 COPB2P35606 906 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 OAZ1P54368 228 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 SEC23AQ15436 765 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 BTNL9Q6UXG8 535 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 ABRAQ8N0Z2 381 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 NCOA7Q8NI08 942 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 TRIB2Q92519 343 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 CHMP4CQ96CF2 233 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 APBA2Q99767 749 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 UBAC1Q9BSL1 405 aa24.02■■□□□ 1.44
CCS-208ENST00000533244 SLC27A2O14975 620 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 INHAP05111 366 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 MTFR1Q15390 333 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 NCAPG2Q86XI2 1143 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 PNMA1Q8ND90 353 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 MTMR7Q9Y216 660 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 HMGCRP04035 888 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 UBXN2AP68543 259 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 ZNF543Q08ER8 600 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 CCDC96Q2M329 555 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 CREB3L3Q68CJ9 461 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 RALYLQ86SE5 291 aaKnown RBP24.01■■□□□ 1.43
CCS-208ENST00000533244 MB21D2Q8IYB1 491 aaPredicted RBP24.01■■□□□ 1.43
CCS-208ENST00000533244 TRMT44Q8IYL2 757 aaKnown RBP24.01■■□□□ 1.43
CCS-208ENST00000533244 PRR12Q9ULL5 1215 aa24.01■■□□□ 1.43
CCS-208ENST00000533244 ISY1Q9ULR0 285 aaKnown RBP24.01■■□□□ 1.43
CCS-208ENST00000533244 POTEFA5A3E0 1075 aa24■■□□□ 1.43
CCS-208ENST00000533244 ADORA2AP29274 412 aa24■■□□□ 1.43
CCS-208ENST00000533244 SNRNP48Q6IEG0 339 aaKnown RBP24■■□□□ 1.43
CCS-208ENST00000533244 TTBK2Q6IQ55 1244 aa24■■□□□ 1.43
CCS-208ENST00000533244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24■■□□□ 1.435e-6■■■■■ 45.5
CCS-208ENST00000533244 KAT14Q9H8E8 782 aa24■■□□□ 1.43
CCS-208ENST00000533244 BIN2Q9UBW5 565 aaPredicted RBP24■■□□□ 1.43
CCS-208ENST00000533244 RIPK3Q9Y572 518 aa24■■□□□ 1.43
CCS-208ENST00000533244 ZNF536O15090 1300 aa24■■□□□ 1.43
CCS-208ENST00000533244 IGHA2P01877 340 aa23.99■■□□□ 1.43
CCS-208ENST00000533244 ANTXR2P58335 489 aa23.99■■□□□ 1.43
CCS-208ENST00000533244 IKQ13123 557 aaPredicted RBP23.99■■□□□ 1.43
CCS-208ENST00000533244 RAVER2Q9HCJ3 691 aaKnown RBP23.99■■□□□ 1.43
CCS-208ENST00000533244 FRMPD2Q68DX3 1309 aaPredicted RBP23.99■■□□□ 1.43
CCS-208ENST00000533244 CCL5P13501 91 aa23.98■■□□□ 1.43
CCS-208ENST00000533244 CCL14Q16627 93 aa23.98■■□□□ 1.43
CCS-208ENST00000533244 GPATCH4Q5T3I0 446 aaKnown RBP23.98■■□□□ 1.43
CCS-208ENST00000533244 MAP3K21Q5TCX8 1036 aa23.98■■□□□ 1.43
CCS-208ENST00000533244 CPXCR1Q8N123 301 aa23.98■■□□□ 1.43
CCS-208ENST00000533244 TMEM106CQ9BVX2 250 aa23.98■■□□□ 1.43
CCS-208ENST00000533244 MYCP01106 439 aaPredicted RBP23.97■■□□□ 1.43
CCS-208ENST00000533244 FCER1AP12319 257 aa23.97■■□□□ 1.43
CCS-208ENST00000533244 ZKSCAN1P17029 563 aaPredicted RBP23.97■■□□□ 1.43
CCS-208ENST00000533244 IFIT1BQ5T764 474 aaKnown RBP23.97■■□□□ 1.43
CCS-208ENST00000533244 SYDE2Q5VT97 1194 aa23.97■■□□□ 1.43
CCS-208ENST00000533244 NPLOC4Q8TAT6 608 aa23.97■■□□□ 1.43
CCS-208ENST00000533244 UNC93B1Q9H1C4 597 aa23.97■■□□□ 1.43
CCS-208ENST00000533244 RANBP17Q9H2T7 1088 aaKnown RBP23.97■■□□□ 1.43
CCS-208ENST00000533244 CTDP1Q9Y5B0 961 aaPredicted RBP23.97■■□□□ 1.43
CCS-208ENST00000533244 COBLO75128 1261 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 SLC16A2P36021 539 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 TRIM32Q13049 653 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 MTA3Q9BTC8 594 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 GPCPD1Q9NPB8 672 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 FLRT1Q9NZU1 646 aa23.96■■□□□ 1.43
CCS-208ENST00000533244 ZNFX1Q9P2E3 1918 aaKnown RBP23.96■■□□□ 1.43
CCS-208ENST00000533244 GJB1P08034 283 aa23.95■■□□□ 1.42
CCS-208ENST00000533244 COL9A3Q14050 684 aaPredicted RBP23.95■■□□□ 1.42
CCS-208ENST00000533244 RNF20Q5VTR2 975 aa23.95■■□□□ 1.42
CCS-208ENST00000533244 MMP19Q99542 508 aa23.95■■□□□ 1.42
CCS-208ENST00000533244 PAK6Q9NQU5 681 aaPredicted RBP23.95■■□□□ 1.42
CCS-208ENST00000533244 IFIT3O14879 490 aaKnown RBP23.94■■□□□ 1.42
CCS-208ENST00000533244 TSGA10IPQ3SY00 556 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 ASPRV1Q53RT3 343 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 CHST3Q7LGC8 479 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 DPP9Q86TI2 863 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 CHST13Q8NET6 341 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 IGDCC4Q8TDY8 1250 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 RNF208Q9H0X6 261 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 RPTORQ8N122 1335 aa23.94■■□□□ 1.42
CCS-208ENST00000533244 KCTD2Q14681 263 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 SART3Q15020 963 aaKnown RBP23.93■■□□□ 1.42
CCS-208ENST00000533244 OLFML2BQ68BL8 750 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 AGBL1Q96MI9 1066 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 SENP2Q9HC62 589 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 FBXO40Q9UH90 709 aa23.93■■□□□ 1.42
CCS-208ENST00000533244 ERICH2A1L162 156 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms