RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 FDX1P10109 184 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 SLC1A4P43007 532 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 RRP12Q5JTH9 1297 aaKnown RBP19.66■□□□□ 0.74
PKP3-209ENST00000533069 OLFML2BQ68BL8 750 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 TBC1D10CQ8IV04 446 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 ANKLE1Q8NAG6 615 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 NBPF3Q9H094 633 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 CTNNA3Q9UI47 895 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 STAT2P52630 851 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 OAZ1P54368 228 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 KCTD2Q14681 263 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 FAM160B2Q86V87 743 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 NPLOC4Q8TAT6 608 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 RUFY2Q8WXA3 655 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 KIFC2Q96AC6 838 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 HTATIP2Q9BUP3 242 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 SLC38A10Q9HBR0 1119 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 FLRT1Q9NZU1 646 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 PARP14Q460N5 1801 aa19.65■□□□□ 0.74
PKP3-209ENST00000533069 DOCK3Q8IZD9 2030 aa19.64■□□□□ 0.74
PKP3-209ENST00000533069 TMEM232C9JQI7 657 aa19.64■□□□□ 0.73
PKP3-209ENST00000533069 PLA2G6O60733 806 aa19.64■□□□□ 0.73
PKP3-209ENST00000533069 IMMTQ16891 758 aaKnown RBP19.64■□□□□ 0.73
PKP3-209ENST00000533069 SNRNP48Q6IEG0 339 aaKnown RBP19.64■□□□□ 0.73
PKP3-209ENST00000533069 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
PKP3-209ENST00000533069 ESR2Q92731 530 aa19.64■□□□□ 0.73
PKP3-209ENST00000533069 MMP19Q99542 508 aa19.64■□□□□ 0.73
PKP3-209ENST00000533069 ISY1Q9ULR0 285 aaKnown RBP19.64■□□□□ 0.73
PKP3-209ENST00000533069 COBLO75128 1261 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 IGHA2P01877 340 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 TOP1P11387 765 aaKnown RBP19.63■□□□□ 0.73
PKP3-209ENST00000533069 MCCP23508 829 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 DCAF4Q8WV16 495 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 TTC14Q96N46 770 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 OGDHLQ9ULD0 1010 aa19.63■□□□□ 0.73
PKP3-209ENST00000533069 PDE4DIPQ5VU43 2346 aa19.62■□□□□ 0.73
PKP3-209ENST00000533069 CCND3P30281 292 aaPredicted RBP19.62■□□□□ 0.73
PKP3-209ENST00000533069 IKQ13123 557 aaPredicted RBP19.62■□□□□ 0.73
PKP3-209ENST00000533069 RCSD1Q6JBY9 416 aa19.62■□□□□ 0.73
PKP3-209ENST00000533069 FBXO40Q9UH90 709 aa19.62■□□□□ 0.73
PKP3-209ENST00000533069 DIS3Q9Y2L1 958 aaKnown RBP19.62■□□□□ 0.73
PKP3-209ENST00000533069 MYH4Q9Y623 1939 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 NEDD4P46934 1319 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 MSCO60682 206 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 CHMLP26374 656 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 CYP2C19P33261 490 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 CCDC178Q5BJE1 867 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.61■□□□□ 0.73
PKP3-209ENST00000533069 CPXCR1Q8N123 301 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 MAML3Q96JK9 1138 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 TMEM47Q9BQJ4 181 aa19.61■□□□□ 0.73
PKP3-209ENST00000533069 CYBAP13498 195 aa19.6■□□□□ 0.73
PKP3-209ENST00000533069 KCTD1Q719H9 257 aa19.6■□□□□ 0.73
PKP3-209ENST00000533069 NECAB2Q7Z6G3 386 aa19.6■□□□□ 0.73
PKP3-209ENST00000533069 IL25Q9H293 177 aa19.6■□□□□ 0.73
PKP3-209ENST00000533069 RAVER2Q9HCJ3 691 aaKnown RBP19.6■□□□□ 0.73
PKP3-209ENST00000533069 CCDC96Q2M329 555 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 ZNF792Q3KQV3 632 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 LHX8Q68G74 356 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 IQCA1Q86XH1 822 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 DGKHQ86XP1 1220 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 CHST13Q8NET6 341 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 PAWRQ96IZ0 340 aaKnown RBP19.59■□□□□ 0.73
PKP3-209ENST00000533069 KRT23Q9C075 422 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 CNNM2Q9H8M5 875 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 DDX20Q9UHI6 824 aaKnown RBP19.59■□□□□ 0.73
PKP3-209ENST00000533069 NRBP1Q9UHY1 535 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 RIPK3Q9Y572 518 aa19.59■□□□□ 0.73
PKP3-209ENST00000533069 KDM4AO75164 1064 aa19.58■□□□□ 0.72
PKP3-209ENST00000533069 PGK2P07205 417 aa19.58■□□□□ 0.72
PKP3-209ENST00000533069 DPF3Q92784 378 aa19.58■□□□□ 0.72
PKP3-209ENST00000533069 LAMA4Q16363 1823 aa19.58■□□□□ 0.72
PKP3-209ENST00000533069 SGSM2O43147 1006 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 CNGA1P29973 690 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 TKFCQ3LXA3 575 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 BTNL9Q6UXG8 535 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 MSL3Q8N5Y2 521 aaKnown RBP19.57■□□□□ 0.72
PKP3-209ENST00000533069 TRPV1Q8NER1 839 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 DIS3LQ8TF46 1054 aaKnown RBP19.57■□□□□ 0.72
PKP3-209ENST00000533069 DDX11Q96FC9 970 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 PRR12Q9ULL5 1215 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 MTMR7Q9Y216 660 aa19.57■□□□□ 0.72
PKP3-209ENST00000533069 COL11A1P12107 1806 aaPredicted RBP19.56■□□□□ 0.72
PKP3-209ENST00000533069 SEPT4O43236 478 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 MNX1P50219 401 aaPredicted RBP19.56■□□□□ 0.72
PKP3-209ENST00000533069 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 ANKRD35Q8N283 1001 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 CHMP4CQ96CF2 233 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 TINF2Q9BSI4 451 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 C11orf49Q9H6J7 331 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 ACAD9Q9H845 621 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 NR2E3Q9Y5X4 410 aa19.56■□□□□ 0.72
PKP3-209ENST00000533069 U3KPZ7 1027 aaPredicted RBP19.56■□□□□ 0.72
PKP3-209ENST00000533069 ZNF536O15090 1300 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 DNAJC25-GNG10A0A024R161 153 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 B4E1Z4 1266 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 SNHG28P0DPA3 235 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 PDHBP11177 359 aa19.55■□□□□ 0.72
PKP3-209ENST00000533069 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms