RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 SENP6Q9GZR1 1112 aaPredicted RBP11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 MKNK2Q9HBH9 465 aa11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 ZNF287Q9HBT7 754 aa11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 FLRT1Q9NZU1 646 aa11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 CTDP1Q9Y5B0 961 aaPredicted RBP11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 CEP290O15078 2479 aa11.54□□□□□ -0.56
PPFIA1-223ENST00000532793 CYP2D7A0A087X1C5 515 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 DNM1LO00429 736 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 COL6A1P12109 1028 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 FCER1AP12319 257 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 MAGEA10P43363 369 aaPredicted RBP11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 SLFNL1Q499Z3 407 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 OLFML2BQ68BL8 750 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 TDHQ8IZJ6 230 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
PPFIA1-223ENST00000532793 MINDY4BA8MYZ0 360 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 APPP05067 770 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 CYBAP13498 195 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 COPB2P35606 906 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 TDO2P48775 406 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 KCTD2Q14681 263 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 ABRAQ8N0Z2 381 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 MMP19Q99542 508 aa11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 PUS7LQ9H0K6 701 aaKnown RBP11.52□□□□□ -0.57
PPFIA1-223ENST00000532793 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 ERC2O15083 957 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 SEPT4O43236 478 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 GNAT2P19087 354 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 STK11IPQ8N1F8 1099 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 KBTBD3Q8NAB2 608 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 APPBP2Q92624 585 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 NACAP1Q9BZK3 213 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 VPS9D1Q9Y2B5 631 aa11.51□□□□□ -0.57
PPFIA1-223ENST00000532793 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 TMEM132BQ14DG7 1078 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 KIAA1755Q5JYT7 1200 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 FAM83BQ5T0W9 1011 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 GJC2Q5T442 439 aaPredicted RBP11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 PPP1R9AQ9ULJ8 1098 aa11.5□□□□□ -0.57
PPFIA1-223ENST00000532793 VWA5AO00534 786 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 GPAA1O43292 621 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 COBLO75128 1261 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 CHGBP05060 677 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 RARBP10826 455 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 STAT3P40763 770 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 SLC4A3P48751 1232 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 RTP1P59025 263 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 SBK1Q52WX2 424 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 RIOX2Q8IUF8 465 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 STRBPQ96SI9 672 aaKnown RBP11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 DCTPP1Q9H773 170 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 PRDM5Q9NQX1 630 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 NRBP1Q9UHY1 535 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 ISY1Q9ULR0 285 aaKnown RBP11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 ATP11BQ9Y2G3 1177 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
PPFIA1-223ENST00000532793 PDE4BQ07343 736 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 RNF180Q86T96 592 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 DEFB123Q8N688 67 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 TRPV1Q8NER1 839 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 DDX11Q96FC9 970 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 FSD1Q9BTV5 496 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 FBXO28Q9NVF7 368 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 NYAP2Q9P242 653 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 TTC41PQ6P2S7 1318 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 ROBO3Q96MS0 1386 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 SMCHD1A6NHR9 2005 aa11.48□□□□□ -0.57
PPFIA1-223ENST00000532793 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 F5H6K3 240 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 SMIM22K7EJ46 135 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 ZBED4O75132 1171 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 PGK2P07205 417 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 TSPY3P0CV98 308 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 TSPY8P0CW00 308 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 AKR1A1P14550 325 aa11.47□□□□□ -0.57
PPFIA1-223ENST00000532793 RASA1P20936 1047 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms