RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	MKNK2	Q9HBH9	465 aa		11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	ZNF287	Q9HBT7	754 aa		11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	FLRT1	Q9NZU1	646 aa		11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	CEP290	O15078	2479 aa		11.54	□□□□□ -0.56
PPFIA1-223	ENST00000532793	CYP2D7	A0A087X1C5	515 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	DNM1L	O00429	736 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	SMARCA5	O60264	1052 aa	Predicted RBP	11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	COL6A1	P12109	1028 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	FCER1A	P12319	257 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	EEF2	P13639	858 aa	Known RBP	11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	MAGEA10	P43363	369 aa	Predicted RBP	11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	SLFNL1	Q499Z3	407 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	OLFML2B	Q68BL8	750 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	CLEC10A	Q8IUN9	316 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	TDH	Q8IZJ6	230 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	ATG4C	Q96DT6	458 aa		11.53	□□□□□ -0.56
PPFIA1-223	ENST00000532793	MINDY4B	A8MYZ0	360 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	APP	P05067	770 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ZFY	P08048	801 aa	Predicted RBP	11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CYBA	P13498	195 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	COPB2	P35606	906 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TDO2	P48775	406 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	KCTD2	Q14681	263 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	LRRC26	Q2I0M4	334 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CTR9	Q6PD62	1173 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ABRA	Q8N0Z2	381 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	MMP19	Q99542	508 aa		11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PUS7L	Q9H0K6	701 aa	Known RBP	11.52	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GREB1L	Q9C091	1923 aa	Predicted RBP	11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ERC2	O15083	957 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SEPT4	O43236	478 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GNAT2	P19087	354 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	MDM2	Q00987	491 aa	Predicted RBP	11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	THSD4	Q6ZMP0	1018 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	STK11IP	Q8N1F8	1099 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	KBTBD3	Q8NAB2	608 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	APPBP2	Q92624	585 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	LRCH3	Q96II8	777 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	NACAP1	Q9BZK3	213 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	VPS9D1	Q9Y2B5	631 aa		11.51	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SOX1	O00570	391 aa	Predicted RBP	11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RNF113A	O15541	343 aa	Known RBP	11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SLC3A2	P08195	630 aa	Known RBP	11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TMEM132B	Q14DG7	1078 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	KIAA1755	Q5JYT7	1200 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	FAM83B	Q5T0W9	1011 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GJC2	Q5T442	439 aa	Predicted RBP	11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	C20orf194	Q5TEA3	1177 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GIMAP6	Q6P9H5	292 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PPP1R9A	Q9ULJ8	1098 aa		11.5	□□□□□ -0.57
PPFIA1-223	ENST00000532793	VWA5A	O00534	786 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GPAA1	O43292	621 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	COBL	O75128	1261 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CHGB	P05060	677 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RARB	P10826	455 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	STAT3	P40763	770 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SLC4A3	P48751	1232 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RTP1	P59025	263 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	LRIT3	Q3SXY7	679 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SBK1	Q52WX2	424 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ANO1	Q5XXA6	986 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RIOX2	Q8IUF8	465 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	MAML3	Q96JK9	1138 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	STRBP	Q96SI9	672 aa	Known RBP	11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SLF1	Q9BQI6	1058 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	DCTPP1	Q9H773	170 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	NRBP1	Q9UHY1	535 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ISY1	Q9ULR0	285 aa	Known RBP	11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	CNPY2	Q9Y2B0	182 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ATP11B	Q9Y2G3	1177 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	LTBP2	Q14767	1821 aa		11.49	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PDE4B	Q07343	736 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RNF180	Q86T96	592 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SIAH1	Q8IUQ4	282 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	DEFB123	Q8N688	67 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SLC17A8	Q8NDX2	589 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TRPV1	Q8NER1	839 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	DDX11	Q96FC9	970 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	FSD1	Q9BTV5	496 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TEX13B	Q9BXU2	312 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	FBXO28	Q9NVF7	368 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	NYAP2	Q9P242	653 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	DIS3	Q9Y2L1	958 aa	Known RBP	11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TTC41P	Q6P2S7	1318 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ROBO3	Q96MS0	1386 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SMCHD1	A6NHR9	2005 aa		11.48	□□□□□ -0.57
PPFIA1-223	ENST00000532793	GSG1L2	A8MUP6	293 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793		F5H6K3	240 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	SMIM22	K7EJ46	135 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RIOK3	O14730	519 aa	Known RBP	11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	ZBED4	O75132	1171 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	PGK2	P07205	417 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TSPY3	P0CV98	308 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	TSPY8	P0CW00	308 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	AKR1A1	P14550	325 aa		11.47	□□□□□ -0.57
PPFIA1-223	ENST00000532793	RASA1	P20936	1047 aa		11.47	□□□□□ -0.57

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