RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PRO3102Q9H379 93 aa21.15■□□□□ 0.98
SMG1-203ENST00000532700 C11orf49Q9H6J7 331 aa21.15■□□□□ 0.98
SMG1-203ENST00000532700 SMCHD1A6NHR9 2005 aa21.15■□□□□ 0.98
SMG1-203ENST00000532700 LCTP09848 1927 aa21.15■□□□□ 0.98
SMG1-203ENST00000532700 CNGA1P29973 690 aa21.14■□□□□ 0.97
SMG1-203ENST00000532700 SNRNP48Q6IEG0 339 aaKnown RBP21.14■□□□□ 0.97
SMG1-203ENST00000532700 ABRAQ8N0Z2 381 aa21.14■□□□□ 0.97
SMG1-203ENST00000532700 MMP19Q99542 508 aa21.14■□□□□ 0.97
SMG1-203ENST00000532700 ZNF287Q9HBT7 754 aa21.14■□□□□ 0.97
SMG1-203ENST00000532700 RAVER2Q9HCJ3 691 aaKnown RBP21.14■□□□□ 0.97
SMG1-203ENST00000532700 RBM27Q9P2N5 1060 aaKnown RBP21.14■□□□□ 0.97
SMG1-203ENST00000532700 DDX20Q9UHI6 824 aaKnown RBP21.14■□□□□ 0.97
SMG1-203ENST00000532700 MCM3APO60318 1980 aa21.14■□□□□ 0.97
SMG1-203ENST00000532700 EVI5O60447 810 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 SLC25A27O95847 323 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 FCER1AP12319 257 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 SNAP25P60880 206 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 ZNF792Q3KQV3 632 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 C7orf61Q8IZ16 206 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 CPXCR1Q8N123 301 aa21.13■□□□□ 0.97
SMG1-203ENST00000532700 TSPY2A6NKD2 308 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 ORC4O43929 436 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 RANBP6O60518 1105 aaKnown RBP21.12■□□□□ 0.97
SMG1-203ENST00000532700 SLC3A2P08195 630 aaKnown RBP21.12■□□□□ 0.97
SMG1-203ENST00000532700 GSPT1P15170 499 aaKnown RBP21.12■□□□□ 0.97
SMG1-203ENST00000532700 MCCP23508 829 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 NOVP48745 357 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 SLC4A3P48751 1232 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 FXR1P51114 621 aaKnown RBP eCLIP21.12■□□□□ 0.97
SMG1-203ENST00000532700 LRRC26Q2I0M4 334 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 KCTD1Q719H9 257 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 PRPF38AQ8NAV1 312 aaKnown RBP21.12■□□□□ 0.97
SMG1-203ENST00000532700 FGD4Q96M96 766 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 SLC38A10Q9HBR0 1119 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 ZMYND8Q9ULU4 1186 aaPredicted RBP21.12■□□□□ 0.97
SMG1-203ENST00000532700 STX8Q9UNK0 236 aa21.12■□□□□ 0.97
SMG1-203ENST00000532700 ZNF536O15090 1300 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 ZMYM6O95789 1325 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 NEDD4P46934 1319 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 RANBP2P49792 3224 aaKnown RBP21.11■□□□□ 0.97
SMG1-203ENST00000532700 TMEM232C9JQI7 657 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 BMP3P12645 472 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 RRP12Q5JTH9 1297 aaKnown RBP21.11■□□□□ 0.97
SMG1-203ENST00000532700 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
SMG1-203ENST00000532700 LENG1Q96BZ8 264 aaPredicted RBP21.11■□□□□ 0.97
SMG1-203ENST00000532700 TEX13BQ9BXU2 312 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 LRRC37A2A6NM11 1700 aa21.11■□□□□ 0.97
SMG1-203ENST00000532700 SYN1P17600 705 aa21.1■□□□□ 0.97
SMG1-203ENST00000532700 FEM1BQ9UK73 627 aa21.1■□□□□ 0.97
SMG1-203ENST00000532700 SYNPO2Q9UMS6 1093 aa21.1■□□□□ 0.97
SMG1-203ENST00000532700 TRIOBPQ9H2D6 2365 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 DNAJC25-GNG10A0A024R161 153 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 ATP2A1O14983 1001 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 CAPN2P17655 700 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 GJC2Q5T442 439 aaPredicted RBP21.09■□□□□ 0.97
SMG1-203ENST00000532700 RCSD1Q6JBY9 416 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 GMCL1Q96IK5 515 aa21.09■□□□□ 0.97
SMG1-203ENST00000532700 DDX49Q9Y6V7 483 aaKnown RBP21.09■□□□□ 0.97
SMG1-203ENST00000532700 KCTD2Q14681 263 aa21.08■□□□□ 0.97
SMG1-203ENST00000532700 TTBK2Q6IQ55 1244 aa21.08■□□□□ 0.97
SMG1-203ENST00000532700 AGBL1Q96MI9 1066 aa21.08■□□□□ 0.97
SMG1-203ENST00000532700 TOMM22Q9NS69 142 aa21.08■□□□□ 0.97
SMG1-203ENST00000532700 NR2E3Q9Y5X4 410 aa21.08■□□□□ 0.97
SMG1-203ENST00000532700 LTBP2Q14767 1821 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 SEPT4O43236 478 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 SLC1A4P43007 532 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 TINF2Q9BSI4 451 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 HOMER2Q9NSB8 354 aa21.07■□□□□ 0.96
SMG1-203ENST00000532700 ISY1Q9ULR0 285 aaKnown RBP21.07■□□□□ 0.96
SMG1-203ENST00000532700 DNAH12Q6ZR08 3092 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 ZBED4O75132 1171 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 SNAI1O95863 264 aaPredicted RBP21.06■□□□□ 0.96
SMG1-203ENST00000532700 ZNF865P0CJ78 1059 aaPredicted RBP21.06■□□□□ 0.96
SMG1-203ENST00000532700 STAT2P52630 851 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 TTC22Q5TAA0 569 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 TICAM2Q86XR7 235 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 STAG1Q8WVM7 1258 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 ZKSCAN3Q9BRR0 538 aa21.06■□□□□ 0.96
SMG1-203ENST00000532700 FRMPD2Q68DX3 1309 aaPredicted RBP21.05■□□□□ 0.96
SMG1-203ENST00000532700 ADCY6O43306 1168 aa21.05■□□□□ 0.96
SMG1-203ENST00000532700 SLC16A2P36021 539 aa21.05■□□□□ 0.96
SMG1-203ENST00000532700 IRX5P78411 483 aaPredicted RBP21.05■□□□□ 0.96
SMG1-203ENST00000532700 AKNAD1Q5T1N1 836 aa21.05■□□□□ 0.96
SMG1-203ENST00000532700 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMG1-203ENST00000532700 SENP6Q9GZR1 1112 aaPredicted RBP21.05■□□□□ 0.96
SMG1-203ENST00000532700 DIAPH3Q9NSV4 1193 aa21.05■□□□□ 0.96
SMG1-203ENST00000532700 PRR12Q9ULL5 1215 aa21.05■□□□□ 0.96
SMG1-203ENST00000532700 ASTN1O14525 1302 aa21.04■□□□□ 0.96
SMG1-203ENST00000532700 ATN1P54259 1190 aaPredicted RBP21.04■□□□□ 0.96
SMG1-203ENST00000532700 CNTN2Q02246 1040 aa21.04■□□□□ 0.96
SMG1-203ENST00000532700 MUM1L1Q5H9M0 696 aa21.04■□□□□ 0.96
SMG1-203ENST00000532700 CCDC174Q6PII3 467 aa21.04■□□□□ 0.96
SMG1-203ENST00000532700 SLC5A4Q9NY91 659 aa21.04■□□□□ 0.96
SMG1-203ENST00000532700 DIS3Q9Y2L1 958 aaKnown RBP21.04■□□□□ 0.96
SMG1-203ENST00000532700 SZT2Q5T011 3432 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 DNM1LO00429 736 aa21.03■□□□□ 0.96
SMG1-203ENST00000532700 SOX1O00570 391 aaPredicted RBP21.03■□□□□ 0.96
SMG1-203ENST00000532700 MSCO60682 206 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms