RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 TDHQ8IZJ6 230 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 OSBP2Q969R2 916 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 LRCH3Q96II8 777 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 MKNK2Q9HBH9 465 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 FBXO28Q9NVF7 368 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 PPP1R9AQ9ULJ8 1098 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
DEPDC7-204ENST00000532078 SEPT4O43236 478 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 GNAT2P19087 354 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 RASA1P20936 1047 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 COPB2P35606 906 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 FAM83BQ5T0W9 1011 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 RIOX2Q8IUF8 465 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 MAML3Q96JK9 1138 aa18.17■□□□□ 0.5
DEPDC7-204ENST00000532078 MINDY4BA8MYZ0 360 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 KBTBD13C9JR72 458 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 VWA5AO00534 786 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 GPAA1O43292 621 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 TDO2P48775 406 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 KCTD2Q14681 263 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 GPR153Q6NV75 609 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 MMP19Q99542 508 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 ZNF287Q9HBT7 754 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 NYAP2Q9P242 653 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
DEPDC7-204ENST00000532078 ERC2O15083 957 aa18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 STAT3P40763 770 aa18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 LRIT3Q3SXY7 679 aa18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 ZNF214Q9UL59 606 aaPredicted RBP18.15■□□□□ 0.5
DEPDC7-204ENST00000532078 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
DEPDC7-204ENST00000532078 TMEM92Q6UXU6 159 aa18.14■□□□□ 0.49
DEPDC7-204ENST00000532078 STK11IPQ8N1F8 1099 aa18.14■□□□□ 0.49
DEPDC7-204ENST00000532078 SLF1Q9BQI6 1058 aa18.14■□□□□ 0.49
DEPDC7-204ENST00000532078 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
DEPDC7-204ENST00000532078 ZNFX1Q9P2E3 1918 aaKnown RBP18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 M0R2C6 588 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 APPP05067 770 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 RTP1P59025 263 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 MDM2Q00987 491 aaPredicted RBP18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 ANO1Q5XXA6 986 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 SPRYD3Q8NCJ5 442 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 REPS2Q8NFH8 660 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 NUP88Q99567 741 aaPredicted RBP18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 LBHD1Q9BQE6 289 aaPredicted RBP18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 NACAP1Q9BZK3 213 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 PRKAG2Q9UGJ0 569 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 DIS3Q9Y2L1 958 aaKnown RBP18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 MYH4Q9Y623 1939 aa18.13■□□□□ 0.49
DEPDC7-204ENST00000532078 F5H6K3 240 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 SNPHO15079 494 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 NDUFB10O96000 172 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 PGK2P07205 417 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 KLRC3Q07444 240 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 PRAMEF19Q5SWL8 479 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 ZNF444Q8N0Y2 327 aaPredicted RBP18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 SYNPO2Q9UMS6 1093 aa18.12■□□□□ 0.49
DEPDC7-204ENST00000532078 IGKV6D-41A0A0C4DH26 115 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 ZNF792Q3KQV3 632 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 FAM47AQ5JRC9 791 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 SNRNP48Q6IEG0 339 aaKnown RBP18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 PRPF38AQ8NAV1 312 aaKnown RBP18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 TINF2Q9BSI4 451 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 CLIP2Q9UDT6 1046 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 ATP11BQ9Y2G3 1177 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 PLIN4Q96Q06 1357 aa18.11■□□□□ 0.49
DEPDC7-204ENST00000532078 COL6A3P12111 3177 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 LTBP2Q14767 1821 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 PRDM1O75626 825 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 RARBP10826 455 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 PDE4BQ07343 736 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 LRRC41Q15345 812 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 XPNPEP3Q9NQH7 507 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 CTDP1Q9Y5B0 961 aaPredicted RBP18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 PCDHB15Q9Y5E8 787 aa18.1■□□□□ 0.49
DEPDC7-204ENST00000532078 LAMA2P24043 3122 aaKnown RBP18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 TTLL1O95922 423 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 MX1P20591 662 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 SNX17Q15036 470 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 SLC39A5Q6ZMH5 540 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 DEFB123Q8N688 67 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 CEP95Q96GE4 821 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 NAPBQ9H115 298 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 MTMR4Q9NYA4 1195 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
DEPDC7-204ENST00000532078 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 ZBED4O75132 1171 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 TSPY3P0CV98 308 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 TSPY8P0CW00 308 aa18.08■□□□□ 0.48
DEPDC7-204ENST00000532078 ADCYAP1R1P41586 468 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms