RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 U2AF2P26368 475 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■■□□□ 14
ECHDC1-221ENST00000531582 CHMLP26374 656 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ATICP31939 592 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 NF2P35240 595 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 FANCCQ00597 558 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ZNF252P-AS1Q0IIN9 211 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 PRPF4BQ13523 1007 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 MBTPS1Q14703 1052 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ZRSR1Q15695 479 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 LDLRAD1Q5T700 205 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 HHATQ5VTY9 493 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 LARP1BQ659C4 914 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 SHISA2Q6UWI4 295 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ERMP1Q7Z2K6 904 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 PCGF5Q86SE9 256 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 LCA5Q86VQ0 697 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 LMNTD2Q8IXW0 634 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ELOA2Q8IYF1 753 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 FAM76AQ8TAV0 307 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 TMEM74Q96NL1 305 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 UTP14AQ9BVJ6 771 aaKnown RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 SEZ6LQ9BYH1 1024 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ANTXR1Q9H6X2 564 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 PSD3Q9NYI0 1048 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ARHGAP31Q2M1Z3 1444 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 BAZ1AQ9NRL2 1556 aaPredicted RBP5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 ROBO2Q9HCK4 1378 aa5.54□□□□□ -1.52
ECHDC1-221ENST00000531582 CECR2Q9BXF3 1484 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 CCDC194A0A1B0GVG4 234 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 ERICH4A6NGS2 130 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 PAGE1O75459 146 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 KRT38O76015 456 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 ECEL1O95672 775 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 IGHA1P01876 353 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GCFC2P16383 781 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GBP2P32456 591 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GATA4P43694 442 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GJA8P48165 433 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 TPM4P67936 248 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 LMNB2Q03252 620 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 KIF4BQ2VIQ3 1234 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 MAP1SQ66K74 1059 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 CAVIN1Q6NZI2 390 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 Q6ZS46 218 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 KIAA1328Q86T90 577 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 MYLK4Q86YV6 388 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 HSCBQ8IWL3 235 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 TRIM42Q8IWZ5 723 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 RNF214Q8ND24 703 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GIMAP7Q8NHV1 300 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GOLGA5Q8TBA6 731 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 UBASH3BQ8TF42 649 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 GIMAP1Q8WWP7 306 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 KIF1BPQ96EK5 621 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 BICD1Q96G01 975 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 ACSBG1Q96GR2 724 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 PANK3Q9H999 370 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 CACNA2D2Q9NY47 1150 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 HOXC10Q9NYD6 342 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 CHMP5Q9NZZ3 219 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 HIF3AQ9Y2N7 669 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 ZMYM3Q14202 1370 aa5.53□□□□□ -1.52
ECHDC1-221ENST00000531582 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 C1QTNF9BB2RNN3 333 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 PDLIM1O00151 329 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 ZSCAN9O15535 394 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 AOC2O75106 756 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 GLB1P16278 677 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 XBP1P17861 261 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 ZNF132P52740 706 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 EIF2B5Q13144 721 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 NEDD9Q14511 834 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 POSTNQ15063 836 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 TTC19Q6DKK2 380 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 SYNE3Q6ZMZ3 975 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 CD163Q86VB7 1156 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 LRRC49Q8IUZ0 686 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 C10orf67Q8IYJ2 551 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 C12orf50Q8NA57 414 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 C1orf131Q8NDD1 294 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 PHC3Q8NDX5 983 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 FBXO18Q8NFZ0 1043 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 PIBF1Q8WXW3 757 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 RSRC1Q96IZ7 334 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 BAG1Q99933 345 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 THUMPD2Q9BTF0 503 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 YIPF2Q9BWQ6 316 aa5.52□□□□□ -1.53
ECHDC1-221ENST00000531582 CCDC86Q9H6F5 360 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms