RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 DDX11Q96FC9 970 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 TEX13BQ9BXU2 312 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 PRDM5Q9NQX1 630 aaPredicted RBP13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 RIPK3Q9Y572 518 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 ZBED4O75132 1171 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 ADCYAP1R1P41586 468 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 TFAP4Q01664 338 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 PPARAQ07869 468 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 LRRC41Q15345 812 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 LRIT3Q3SXY7 679 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 ZMYM1Q5SVZ6 1142 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
FOXRED1-211ENST00000531257 PGK1P00558 417 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 TAL1P17542 331 aaPredicted RBP13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 TRIM60Q495X7 471 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 SLFN13Q68D06 897 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 Q7L0L9 218 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 DEFB123Q8N688 67 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 MKL1Q969V6 931 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 COL6A3P12111 3177 aa13.57□□□□□ -0.24
FOXRED1-211ENST00000531257 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 BMP3P12645 472 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 AKR1A1P14550 325 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 CTDSPL2Q05D32 466 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 RNF180Q86T96 592 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 ANKRD35Q8N283 1001 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 GMCL1P1Q8NEA9 526 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 NEDD1Q8NHV4 660 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 LENG1Q96BZ8 264 aaPredicted RBP13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 NRBP1Q9UHY1 535 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 ZHX1Q9UKY1 873 aaPredicted RBP13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 PLIN4Q96Q06 1357 aa13.56□□□□□ -0.24
FOXRED1-211ENST00000531257 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 HOMER2Q9NSB8 354 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 STX8Q9UNK0 236 aa13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-211ENST00000531257 RANBP6O60518 1105 aaKnown RBP13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 SLC1A4P43007 532 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 STAT2P52630 851 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 VPS53Q5VIR6 699 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 TOMM22Q9NS69 142 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 SYNPO2Q9UMS6 1093 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 SALL3Q9BXA9 1300 aa13.54□□□□□ -0.24
FOXRED1-211ENST00000531257 LCTP09848 1927 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 ATP2A1O14983 1001 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 NMT2O60551 498 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 SNAI1O95863 264 aaPredicted RBP13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 MCCP23508 829 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 SNX17Q15036 470 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 KCTD1Q719H9 257 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 CHST13Q8NET6 341 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 CHURC1Q8WUH1 139 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 BADQ92934 168 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 FBXO40Q9UH90 709 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 PHF24Q9UPV7 400 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
FOXRED1-211ENST00000531257 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 FOXP2O15409 715 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 OAZ1P54368 228 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 PDE1AP54750 535 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 SNAP25P60880 206 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 TLE2Q04725 743 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 RRP12Q5JTH9 1297 aaKnown RBP13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 CCDC174Q6PII3 467 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 MAMDC4Q6UXC1 1216 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 FAM160B2Q86V87 743 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 STAG1Q8WVM7 1258 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 AGBL1Q96MI9 1066 aa13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
FOXRED1-211ENST00000531257 SYNRGQ9UMZ2 1314 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms