RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 MYO9BQ13459 2157 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 BDP1A6H8Y1 2624 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CCDC196A0A1B0GTZ2 297 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 A0A1W2PRG0 241 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CCDC69A6NI79 296 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 DHX16O60231 1041 aaKnown RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 GH2P01242 217 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CHGBP05060 677 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CALM1P0DP23 149 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CALM2P0DP24 149 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CALM3P0DP25 149 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CAPN2P17655 700 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CASTP20810 708 aaKnown RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CCND3P30281 292 aaPredicted RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CDK8P49336 464 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 RBM25P49756 843 aaKnown RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 PLCD1P51178 756 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 USP14P54578 494 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 HAND2P61296 217 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 PTH1RQ03431 593 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CACNB2Q08289 660 aaPredicted RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 BECN1Q14457 450 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 NECTIN1Q15223 517 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 TSGA10IPQ3SY00 556 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 IFIT1BQ5T764 474 aaKnown RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 VPS53Q5VIR6 699 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 GPR142Q7Z601 462 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 CATIPQ7Z7H3 387 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 SIAH1Q8IUQ4 282 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 COA7Q96BR5 231 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 JAKMIP1Q96N16 626 aaKnown RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 TM6SF1Q9BZW5 370 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 KAT14Q9H8E8 782 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 KANSL2Q9H9L4 492 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 EPB41L4AQ9HCS5 686 aaPredicted RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 GOPCQ9HD26 462 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 TMOD4Q9NZQ9 345 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 BTBD7Q9P203 1132 aa5.6□□□□□ -1.51
SSBP3-213ENST00000530618 BIN2Q9UBW5 565 aaPredicted RBP5.6□□□□□ -1.51
SSBP3-213ENST00000530618 SPDYE16A6NNV3 312 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 C19orf81C9J6K1 198 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 USP17L10C9JJH3 530 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 E7EWF7 191 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 IFIT3O14879 490 aaKnown RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 EVI5O60447 810 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TTLL1O95922 423 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TFRCP02786 760 aaKnown RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 HSP90AA1P07900 732 aaKnown RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 CYP21A2P08686 494 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 HOXC6P09630 235 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 VCAM1P19320 739 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 CYP2B6P20813 491 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 KIF5BP33176 963 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 MAGEA10P43363 369 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TFAP4Q01664 338 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 ICA1Q05084 483 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TRAF1Q13077 416 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 GRB14Q14449 540 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 WTAPQ15007 396 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 PPP2R5BQ15173 497 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 LRRC26Q2I0M4 334 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 SLFNL1Q499Z3 407 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TMEM67Q5HYA8 995 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 CATSPERGQ6ZRH7 1159 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 DHX32Q7L7V1 743 aaKnown RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 NECAB2Q7Z6G3 386 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 HSCBQ8IWL3 235 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 C7orf61Q8IZ16 206 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 NPLOC4Q8TAT6 608 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TTC14Q96N46 770 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TBC1D32Q96NH3 1257 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 KIAA1683Q9H0B3 1180 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 HMX1Q9NP08 348 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 PDRG1Q9NUG6 133 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 TCP11L1Q9NUJ3 509 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 PNMA2Q9UL42 364 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 ISY1Q9ULR0 285 aaKnown RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 ZMYND8Q9ULU4 1186 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 NAP1L2Q9ULW6 460 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 STX8Q9UNK0 236 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 CTDP1Q9Y5B0 961 aaPredicted RBP5.59□□□□□ -1.51
SSBP3-213ENST00000530618 NR2E3Q9Y5X4 410 aa5.59□□□□□ -1.51
SSBP3-213ENST00000530618 PLIN4Q96Q06 1357 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 B4E1Z4 1266 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 PRC1O43663 620 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RAD21O60216 631 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 KDM4AO75164 1064 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 CDKL5O76039 1030 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 CYP2D6P10635 497 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 TOP1P11387 765 aaKnown RBP5.58□□□□□ -1.52
SSBP3-213ENST00000530618 SYN1P17600 705 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 PTPREP23469 700 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 MAPK4P31152 587 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 GNAQP50148 359 aa5.58□□□□□ -1.52
SSBP3-213ENST00000530618 RCAN1P53805 252 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms