RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 MSL3Q8N5Y2 521 aaKnown RBP12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 FRAT1Q92837 279 aaPredicted RBP12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 FGD4Q96M96 766 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 UPF3AQ9H1J1 476 aaKnown RBP12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 FAM184BQ9ULE4 1060 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 YBX2Q9Y2T7 364 aaKnown RBP12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
TM9SF1-210ENST00000530563 SYNGAP1Q96PV0 1343 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 ZNF532Q9HCE3 1301 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 PIEZO1Q92508 2521 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 ARVCFO00192 962 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 PRKAB2O43741 272 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 CD4P01730 458 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 ASGR1P07306 291 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 VWCEQ96DN2 955 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 NECAB3Q96P71 396 aaPredicted RBP12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 SH2D4AQ9H788 454 aa12.91□□□□□ -0.34
TM9SF1-210ENST00000530563 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 CDK8P49336 464 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 GJA9P57773 515 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 NKX3-2P78367 333 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 C12orf60Q5U649 245 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 TMEM199Q8N511 208 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 SLC43A3Q8NBI5 491 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 GLT1D1Q96MS3 346 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 NKX2-4Q9H2Z4 354 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 IL23AQ9NPF7 189 aa12.9□□□□□ -0.34
TM9SF1-210ENST00000530563 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 IGFBP4P22692 258 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 CYP2C18P33260 490 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 COPB2P35606 906 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 C16orf86Q6ZW13 317 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 AACSQ86V21 672 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
TM9SF1-210ENST00000530563 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 RLBP1P12271 317 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 TFF2Q03403 129 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 RAB30Q15771 203 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 CCDC144BQ3MJ40 725 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 MSRAQ9UJ68 235 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 WDFY4Q6ZS81 3184 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 ASTN1O14525 1302 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
TM9SF1-210ENST00000530563 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 USP17L21D6R901 530 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 FGBP02675 491 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 CHGBP05060 677 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 C6orf222P0C671 652 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 GNASQ5JWF2 1037 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 SNRNP48Q6IEG0 339 aaKnown RBP12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 SLC28A3Q9HAS3 691 aa12.87□□□□□ -0.35
TM9SF1-210ENST00000530563 GOLIM4O00461 696 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 MBD4O95243 580 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 MYOGP15173 224 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 POU3F3P20264 500 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 KCNQ1P51787 676 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 ZKSCAN2Q63HK3 967 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 SLF1Q9BQI6 1058 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 C1QTNF1Q9BXJ1 281 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 TCF20Q9UGU0 1960 aaKnown RBP12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 GBF1Q92538 1859 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
TM9SF1-210ENST00000530563 TRIOO75962 3097 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms