RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 MTMR4Q9NYA4 1195 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 FEM1BQ9UK73 627 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 GJD2Q9UKL4 321 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 COL11A1P12107 1806 aaPredicted RBP10.72□□□□□ -0.69
CMTM1-210ENST00000528441 TMEM232C9JQI7 657 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
CMTM1-210ENST00000528441 STRNO43815 780 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 FGAP02671 866 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 XRCC5P13010 732 aaKnown RBP10.71□□□□□ -0.69
CMTM1-210ENST00000528441 MCCP23508 829 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 STAT2P52630 851 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 TMEM132BQ14DG7 1078 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
CMTM1-210ENST00000528441 MORN1Q5T089 497 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 TTC22Q5TAA0 569 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
CMTM1-210ENST00000528441 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 ESR2Q92731 530 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.71□□□□□ -0.69
CMTM1-210ENST00000528441 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 HOMER2Q9NSB8 354 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 CTNNA3Q9UI47 895 aa10.71□□□□□ -0.69
CMTM1-210ENST00000528441 VWA5AO00534 786 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 NMT2O60551 498 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 CCND3P30281 292 aaPredicted RBP10.7□□□□□ -0.7
CMTM1-210ENST00000528441 CYP2C19P33261 490 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 TIE1P35590 1138 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
CMTM1-210ENST00000528441 GRB14Q14449 540 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 CCDC174Q6PII3 467 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 FAM160B2Q86V87 743 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 IQCA1Q86XH1 822 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 TICAM2Q86XR7 235 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 ANKRD35Q8N283 1001 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 NPLOC4Q8TAT6 608 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 CHURC1Q8WUH1 139 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 SHISA4Q96DD7 197 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 TEX13BQ9BXU2 312 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 RAVER2Q9HCJ3 691 aaKnown RBP10.7□□□□□ -0.7
CMTM1-210ENST00000528441 NR2E3Q9Y5X4 410 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
CMTM1-210ENST00000528441 A0A0G2JMZ2 1700 aa10.7□□□□□ -0.7
CMTM1-210ENST00000528441 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PLIN4Q96Q06 1357 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 FRMPD2Q68DX3 1309 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 IGKV6D-41A0A0C4DH26 115 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 EVI5O60447 810 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PGK2P07205 417 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PDE4AP27815 886 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 TRDNQ13061 729 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 ALX1Q15699 326 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 RIOX2Q8IUF8 465 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PAWRQ96IZ0 340 aaKnown RBP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
CMTM1-210ENST00000528441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
CMTM1-210ENST00000528441 PARP14Q460N5 1801 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 ORC4O43929 436 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 MSCO60682 206 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
CMTM1-210ENST00000528441 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CMTM1-210ENST00000528441 ALAS1P13196 640 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 CAPN2P17655 700 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 STAG1Q8WVM7 1258 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 UBAC1Q9BSL1 405 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 C11orf49Q9H6J7 331 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 KAT14Q9H8E8 782 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 ZHX1Q9UKY1 873 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-210ENST00000528441 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
CMTM1-210ENST00000528441 ZMYM6O95789 1325 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 RAD50Q92878 1312 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 B4E1Z4 1266 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 KDM4AO75164 1064 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 FDX1P10109 184 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 GSPT1P15170 499 aaKnown RBP10.67□□□□□ -0.7
CMTM1-210ENST00000528441 SNAP25P60880 206 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 RALYLQ86SE5 291 aaKnown RBP10.67□□□□□ -0.7
CMTM1-210ENST00000528441 TBC1D10CQ8IV04 446 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 DIS3LQ8TF46 1054 aaKnown RBP10.67□□□□□ -0.7
CMTM1-210ENST00000528441 DCAF4Q8WV16 495 aa10.67□□□□□ -0.7
CMTM1-210ENST00000528441 MKL1Q969V6 931 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms