RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 DIS3Q9Y2L1 958 aaKnown RBP18.51■□□□□ 0.55
CLNS1A-210ENST00000528364 TACC3Q9Y6A5 838 aa18.51■□□□□ 0.55
CLNS1A-210ENST00000528364 LAMA3Q16787 3333 aa18.51■□□□□ 0.55
CLNS1A-210ENST00000528364 FOXP2O15409 715 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 ZBED4O75132 1171 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 TFAP4Q01664 338 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 PPARAQ07869 468 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 ANKRD45Q5TZF3 282 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 SLFN13Q68D06 897 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 SH3RF1Q7Z6J0 888 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 DDX11Q96FC9 970 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 NACAP1Q9BZK3 213 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 NAPBQ9H115 298 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 XPNPEP3Q9NQH7 507 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
CLNS1A-210ENST00000528364 SNAI1O95863 264 aaPredicted RBP18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 TTLL1O95922 423 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 RARBP10826 455 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 COPB2P35606 906 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 CTDSPL2Q05D32 466 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 LRRFIP1Q32MZ4 808 aaKnown RBP18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 ZNF287Q9HBT7 754 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 PRDM5Q9NQX1 630 aaPredicted RBP18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 PRKAG2Q9UGJ0 569 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 NRBP1Q9UHY1 535 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
CLNS1A-210ENST00000528364 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 TRIM43BA6NCK2 446 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 TLE2Q04725 743 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 PDE4BQ07343 736 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 SNX17Q15036 470 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 GPR153Q6NV75 609 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 TRIM43Q96BQ3 446 aaPredicted RBP18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 FEM1BQ9UK73 627 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 PHF24Q9UPV7 400 aa18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 CTDP1Q9Y5B0 961 aaPredicted RBP18.48■□□□□ 0.55
CLNS1A-210ENST00000528364 DNAJC25-GNG10A0A024R161 153 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 TMEM232C9JQI7 657 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 ATP2A1O14983 1001 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 NMT2O60551 498 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 BMP3P12645 472 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 IRX5P78411 483 aaPredicted RBP18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 VPS53Q5VIR6 699 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 SLC17A8Q8NDX2 589 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 GMCL1P1Q8NEA9 526 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 BADQ92934 168 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 MTMR10Q9NXD2 777 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 CNPY2Q9Y2B0 182 aa18.47■□□□□ 0.55
CLNS1A-210ENST00000528364 AKR1A1P14550 325 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 MCCP23508 829 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 SNAP25P60880 206 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 SHHQ15465 462 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 FGD4Q96M96 766 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 PDLIM7Q9NR12 457 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 IL17RBQ9NRM6 502 aa18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLNS1A-210ENST00000528364 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 SLC3A2P08195 630 aaKnown RBP18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 ITGB8P26012 769 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 C9orf50Q5SZB4 431 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 RASGRP2Q7LDG7 609 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 RNF180Q86T96 592 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 ZHX1Q9UKY1 873 aaPredicted RBP18.45■□□□□ 0.54
CLNS1A-210ENST00000528364 PLIN4Q96Q06 1357 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 MYADML2A6NDP7 307 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 PDE1AP54750 535 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 C1orf53Q5VUE5 145 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 FAM184BQ9ULE4 1060 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 MCM3APO60318 1980 aa18.44■□□□□ 0.54
CLNS1A-210ENST00000528364 A0A1W2PQ45 241 aaPredicted RBP18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 A0A1W2PQY0 241 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 POTEB2H3BUK9 544 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 ADCY6O43306 1168 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 SLC1A4P43007 532 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 ACVR2BQ13705 512 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 MSL3Q8N5Y2 521 aaKnown RBP18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 CHST13Q8NET6 341 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 STAG1Q8WVM7 1258 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 FAM227BQ96M60 508 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 STX8Q9UNK0 236 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 DDX49Q9Y6V7 483 aaKnown RBP18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 ZNF536O15090 1300 aa18.43■□□□□ 0.54
CLNS1A-210ENST00000528364 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms