RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 GDAQ9Y2T3 454 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 GLI3P10071 1580 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 PHKA1P46020 1223 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 MMGT1Q8N4V1 131 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 MAGEB6Q8N7X4 407 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 RUBCNQ92622 972 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 SHISA4Q96DD7 197 aa16.41■□□□□ 0.22
CAPN1-214ENST00000528165 IQSEC3Q9UPP2 1182 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-214ENST00000528165 RCCD1A6NED2 376 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 H0YHG0 523 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 PCCAP05165 728 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 UQCRFS1P1P0C7P4 283 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 MEA1Q16626 185 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 CNPY4Q8N129 248 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 MTA3Q9BTC8 594 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 MAGEC2Q9UBF1 373 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 CAPN7Q9Y6W3 813 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 PRDM1O75626 825 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 EEF1GP26641 437 aaKnown RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-214ENST00000528165 CCDC170Q8IYT3 715 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 MTRQ99707 1265 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 LRRC1Q9BTT6 524 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 PLA2G12BQ9BX93 195 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 CXorf56Q9H5V9 222 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
CAPN1-214ENST00000528165 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 TRIM49BA6NDI0 452 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 HSF2BPO75031 334 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 ITGA6P23229 1130 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 ZNF507Q8TCN5 953 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 HDAC7Q8WUI4 952 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 PDS5AQ29RF7 1337 aaKnown RBP16.39■□□□□ 0.21
CAPN1-214ENST00000528165 EPB41P11171 864 aaKnown RBP16.39■□□□□ 0.21
CAPN1-214ENST00000528165 DNM2P50570 870 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 EPHB4P54760 987 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 SKOR1P84550 965 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 PPP2R5BQ15173 497 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 EZH2Q15910 746 aaKnown RBP16.39■□□□□ 0.21
CAPN1-214ENST00000528165 PKN1Q16512 942 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 ALS2CLQ60I27 953 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 OTUD6BQ8N6M0 293 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 TSGA10Q9BZW7 698 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-214ENST00000528165 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
CAPN1-214ENST00000528165 SNX12Q9UMY4 172 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 CHD4Q14839 1912 aa16.39■□□□□ 0.21
CAPN1-214ENST00000528165 ARID4AP29374 1257 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 EMBQ6PCB8 327 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 CREG2Q8IUH2 290 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 PRPF38AQ8NAV1 312 aaKnown RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 AGPAT5Q9NUQ2 364 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 RTL9Q8NET4 1388 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 PRKAB2O43741 272 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 CYP27A1Q02318 531 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 CABS1Q96KC9 395 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 NUP58Q9BVL2 599 aa16.38■□□□□ 0.21
CAPN1-214ENST00000528165 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
CAPN1-214ENST00000528165 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 MATR3P43243 847 aaKnown RBP eCLIP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 ITIH3Q06033 890 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 PDCLQ13371 301 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 SPATS2Q86XZ4 545 aaKnown RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 ADSSL1Q8N142 457 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 ARL8AQ96BM9 186 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 THAP9Q9H5L6 903 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 B4DLN1 442 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 PDE8BO95263 885 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 VAV2P52735 878 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 PPARAQ07869 468 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 SPA17Q15506 151 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 TTMPQ5BVD1 217 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 SPATA4Q8NEY3 305 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 PCMTD1Q96MG8 357 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 GREM2Q9H772 168 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 MYH6P13533 1939 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 NUTM2BA6NNL0 878 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 NUTM2EB1AL46 878 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 USO1O60763 962 aaKnown RBP16.37■□□□□ 0.21
CAPN1-214ENST00000528165 TACC1O75410 805 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms