RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ZBED4O75132 1171 aa39.05■■■■□ 3.84
SSSCA1-205ENST00000527920 FDX1P10109 184 aa39.05■■■■□ 3.84
SSSCA1-205ENST00000527920 HAND2P61296 217 aa39.05■■■■□ 3.84
SSSCA1-205ENST00000527920 MFSD6Q6ZSS7 791 aa39.05■■■■□ 3.84
SSSCA1-205ENST00000527920 SLC38A10Q9HBR0 1119 aa39.05■■■■□ 3.84
SSSCA1-205ENST00000527920 PLA2G6O60733 806 aa39.04■■■■□ 3.84
SSSCA1-205ENST00000527920 COBLO75128 1261 aa39.04■■■■□ 3.84
SSSCA1-205ENST00000527920 SLC1A4P43007 532 aa39.04■■■■□ 3.84
SSSCA1-205ENST00000527920 TBC1D10CQ8IV04 446 aa39.04■■■■□ 3.84
SSSCA1-205ENST00000527920 OAZ1P54368 228 aa39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 RRP12Q5JTH9 1297 aaKnown RBP39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 FAM160B2Q86V87 743 aa39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 KIFC2Q96AC6 838 aa39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 MMP19Q99542 508 aa39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 RAD50Q92878 1312 aa39.03■■■■□ 3.84
SSSCA1-205ENST00000527920 ZNF213O14771 459 aa39.02■■■■□ 3.84
SSSCA1-205ENST00000527920 STAT2P52630 851 aa39.02■■■■□ 3.84
SSSCA1-205ENST00000527920 CHURC1Q8WUH1 139 aa39.02■■■■□ 3.84
SSSCA1-205ENST00000527920 CCND3P30281 292 aaPredicted RBP39.01■■■■□ 3.84
SSSCA1-205ENST00000527920 KCTD2Q14681 263 aa39.01■■■■□ 3.84
SSSCA1-205ENST00000527920 SNRNP48Q6IEG0 339 aaKnown RBP39.01■■■■□ 3.84
SSSCA1-205ENST00000527920 CTDP1Q9Y5B0 961 aaPredicted RBP39.01■■■■□ 3.84
SSSCA1-205ENST00000527920 TMEM232C9JQI7 657 aa39■■■■□ 3.83
SSSCA1-205ENST00000527920 MCCP23508 829 aa39■■■■□ 3.83
SSSCA1-205ENST00000527920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP39■■■■□ 3.83
SSSCA1-205ENST00000527920 CTNNA3Q9UI47 895 aa39■■■■□ 3.83
SSSCA1-205ENST00000527920 DIS3Q9Y2L1 958 aaKnown RBP39■■■■□ 3.83
SSSCA1-205ENST00000527920 TOP1P11387 765 aaKnown RBP38.99■■■■□ 3.83
SSSCA1-205ENST00000527920 CYP2C19P33261 490 aa38.99■■■■□ 3.83
SSSCA1-205ENST00000527920 LHX8Q68G74 356 aa38.99■■■■□ 3.83
SSSCA1-205ENST00000527920 RCSD1Q6JBY9 416 aa38.99■■■■□ 3.83
SSSCA1-205ENST00000527920 ESR2Q92731 530 aa38.99■■■■□ 3.83
SSSCA1-205ENST00000527920 MSCO60682 206 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 NECAB2Q7Z6G3 386 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 DCAF4Q8WV16 495 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 MAML3Q96JK9 1138 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 TTC14Q96N46 770 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 LAMA4Q16363 1823 aa38.98■■■■□ 3.83
SSSCA1-205ENST00000527920 CYBAP13498 195 aa38.97■■■■□ 3.83
SSSCA1-205ENST00000527920 RUFY2Q8WXA3 655 aa38.97■■■■□ 3.83
SSSCA1-205ENST00000527920 PAWRQ96IZ0 340 aaKnown RBP38.97■■■■□ 3.83
SSSCA1-205ENST00000527920 MNX1P50219 401 aaPredicted RBP38.96■■■■□ 3.83
SSSCA1-205ENST00000527920 IL25Q9H293 177 aa38.96■■■■□ 3.83
SSSCA1-205ENST00000527920 RIPK3Q9Y572 518 aa38.96■■■■□ 3.83
SSSCA1-205ENST00000527920 NEDD4P46934 1319 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 IMMTQ16891 758 aaKnown RBP38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 ZNF792Q3KQV3 632 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 CPXCR1Q8N123 301 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 TMEM47Q9BQJ4 181 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 RAVER2Q9HCJ3 691 aaKnown RBP38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 FBXO40Q9UH90 709 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 NRBP1Q9UHY1 535 aa38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 ISY1Q9ULR0 285 aaKnown RBP38.95■■■■□ 3.83
SSSCA1-205ENST00000527920 CHMLP26374 656 aa38.94■■■■□ 3.82
SSSCA1-205ENST00000527920 CHST13Q8NET6 341 aa38.94■■■■□ 3.82
SSSCA1-205ENST00000527920 DIS3LQ8TF46 1054 aaKnown RBP38.94■■■■□ 3.82
SSSCA1-205ENST00000527920 DPF3Q92784 378 aa38.94■■■■□ 3.82
SSSCA1-205ENST00000527920 DDX20Q9UHI6 824 aaKnown RBP38.94■■■■□ 3.82
SSSCA1-205ENST00000527920 IKQ13123 557 aaPredicted RBP38.93■■■■□ 3.82
SSSCA1-205ENST00000527920 KCTD1Q719H9 257 aa38.93■■■■□ 3.82
SSSCA1-205ENST00000527920 TRPV1Q8NER1 839 aa38.93■■■■□ 3.82
SSSCA1-205ENST00000527920 PGK2P07205 417 aa38.92■■■■□ 3.82
SSSCA1-205ENST00000527920 CCDC178Q5BJE1 867 aa38.91■■■■□ 3.82
SSSCA1-205ENST00000527920 CEP290O15078 2479 aa38.91■■■■□ 3.82
SSSCA1-205ENST00000527920 DNAJC25-GNG10A0A024R161 153 aa38.9■■■■□ 3.82
SSSCA1-205ENST00000527920 BTNL9Q6UXG8 535 aa38.9■■■■□ 3.82
SSSCA1-205ENST00000527920 DGKHQ86XP1 1220 aa38.9■■■■□ 3.82
SSSCA1-205ENST00000527920 MSL3Q8N5Y2 521 aaKnown RBP38.9■■■■□ 3.82
SSSCA1-205ENST00000527920 CNGA1P29973 690 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 CCDC96Q2M329 555 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 IQCA1Q86XH1 822 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 C11orf49Q9H6J7 331 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 PRR12Q9ULL5 1215 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 ZNF536O15090 1300 aa38.89■■■■□ 3.82
SSSCA1-205ENST00000527920 SEPT4O43236 478 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 TKFCQ3LXA3 575 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 CENPQQ7L2Z9 268 aaPredicted RBP38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 RASGRP2Q7LDG7 609 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 DDX11Q96FC9 970 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 TINF2Q9BSI4 451 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 CNNM2Q9H8M5 875 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 NR2E3Q9Y5X4 410 aa38.88■■■■□ 3.81
SSSCA1-205ENST00000527920 ZNFX1Q9P2E3 1918 aaKnown RBP38.87■■■■□ 3.81
SSSCA1-205ENST00000527920 H0YGN5 161 aa38.87■■■■□ 3.81
SSSCA1-205ENST00000527920 KDM4AO75164 1064 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 SNHG28P0DPA3 235 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 PDHBP11177 359 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 COL6A1P12109 1028 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 ZNF467Q7Z7K2 595 aaPredicted RBP38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 KRT23Q9C075 422 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 MTMR7Q9Y216 660 aa38.86■■■■□ 3.81
SSSCA1-205ENST00000527920 ANKS1AQ92625 1134 aa38.85■■■■□ 3.81
SSSCA1-205ENST00000527920 CHMP4CQ96CF2 233 aa38.85■■■■□ 3.81
SSSCA1-205ENST00000527920 ACAD9Q9H845 621 aa38.85■■■■□ 3.81
SSSCA1-205ENST00000527920 SGSM2O43147 1006 aa38.84■■■■□ 3.81
SSSCA1-205ENST00000527920 SLC4A3P48751 1232 aa38.84■■■■□ 3.81
SSSCA1-205ENST00000527920 B4E1Z4 1266 aa38.83■■■■□ 3.81
SSSCA1-205ENST00000527920 EVI5O60447 810 aa38.83■■■■□ 3.81
SSSCA1-205ENST00000527920 MAMDC4Q6UXC1 1216 aa38.83■■■■□ 3.81
SSSCA1-205ENST00000527920 ANKRD35Q8N283 1001 aa38.83■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms