RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 PCDH10Q9P2E7 1040 aa14.9□□□□□ -0.02
SMCO4-202ENST00000525141 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
SMCO4-202ENST00000525141 TTLL1O95922 423 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 PGK2P07205 417 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 HSPD1P10809 573 aaKnown RBP14.89□□□□□ -0.03
SMCO4-202ENST00000525141 FCER1AP12319 257 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 FXR1P51114 621 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMCO4-202ENST00000525141 PDE4BQ07343 736 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 LRRC47Q8N1G4 583 aaKnown RBP14.89□□□□□ -0.03
SMCO4-202ENST00000525141 PRPF38AQ8NAV1 312 aaKnown RBP14.89□□□□□ -0.03
SMCO4-202ENST00000525141 GMCL1P1Q8NEA9 526 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 MAML3Q96JK9 1138 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 SLF1Q9BQI6 1058 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
SMCO4-202ENST00000525141 NR2E3Q9Y5X4 410 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 MYH4Q9Y623 1939 aa14.89□□□□□ -0.03
SMCO4-202ENST00000525141 TRIM6-TRIM34B2RNG4 842 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 TSPY3P0CV98 308 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 TSPY8P0CW00 308 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 SDSP20132 328 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 SLFN13Q68D06 897 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 RILPL2Q969X0 211 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 SYNPO2Q9UMS6 1093 aa14.88□□□□□ -0.03
SMCO4-202ENST00000525141 PLIN4Q96Q06 1357 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 ATP2A1O14983 1001 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 ORC4O43929 436 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
SMCO4-202ENST00000525141 MCCP23508 829 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 CNGA1P29973 690 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 ANO1Q5XXA6 986 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 MMP19Q99542 508 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 SLC38A10Q9HBR0 1119 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
SMCO4-202ENST00000525141 FEM1BQ9UK73 627 aa14.87□□□□□ -0.03
SMCO4-202ENST00000525141 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
SMCO4-202ENST00000525141 DNAJC25-GNG10A0A024R161 153 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 SLC3A2P08195 630 aaKnown RBP14.86□□□□□ -0.03
SMCO4-202ENST00000525141 BMP3P12645 472 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 LRRC26Q2I0M4 334 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 TTC22Q5TAA0 569 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 RASGRP2Q7LDG7 609 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 CPXCR1Q8N123 301 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 DIS3Q9Y2L1 958 aaKnown RBP14.86□□□□□ -0.03
SMCO4-202ENST00000525141 ZNF236Q9UL36 1845 aa14.86□□□□□ -0.03
SMCO4-202ENST00000525141 TMEM232C9JQI7 657 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 RANBP6O60518 1105 aaKnown RBP14.85□□□□□ -0.03
SMCO4-202ENST00000525141 ZBED4O75132 1171 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 SNRNP48Q6IEG0 339 aaKnown RBP14.85□□□□□ -0.03
SMCO4-202ENST00000525141 RCSD1Q6JBY9 416 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 C7orf61Q8IZ16 206 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 STAG1Q8WVM7 1258 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 GMCL1Q96IK5 515 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 FGD4Q96M96 766 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 GDF15Q99988 308 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 TINF2Q9BSI4 451 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 TEX13BQ9BXU2 312 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 ZMYND8Q9ULU4 1186 aaPredicted RBP14.85□□□□□ -0.03
SMCO4-202ENST00000525141 ZNF536O15090 1300 aa14.85□□□□□ -0.03
SMCO4-202ENST00000525141 DNAH12Q6ZR08 3092 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 TSPY2A6NKD2 308 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SEPT4O43236 478 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SNAI1O95863 264 aaPredicted RBP14.84□□□□□ -0.03
SMCO4-202ENST00000525141 ZNF865P0CJ78 1059 aaPredicted RBP14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SLC4A3P48751 1232 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SNAP25P60880 206 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 HAND2P61296 217 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 KCTD2Q14681 263 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
SMCO4-202ENST00000525141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
SMCO4-202ENST00000525141 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
SMCO4-202ENST00000525141 FRMPD3Q5JV73 1810 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 HIP1O00291 1037 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 MSCO60682 206 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 PLA2G6O60733 806 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.04
SMCO4-202ENST00000525141 SYN1P17600 705 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 TTBK2Q6IQ55 1244 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 KCTD1Q719H9 257 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 IL25Q9H293 177 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 TCP11L1Q9NUJ3 509 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
SMCO4-202ENST00000525141 PLXNA1Q9UIW2 1896 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 COPB2P35606 906 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 SLC1A4P43007 532 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 CWC27Q6UX04 472 aaKnown RBP14.82□□□□□ -0.04
SMCO4-202ENST00000525141 MAMDC4Q6UXC1 1216 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 TBC1D10CQ8IV04 446 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 CHURC1Q8WUH1 139 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 TMEM47Q9BQJ4 181 aa14.82□□□□□ -0.04
SMCO4-202ENST00000525141 DNM1LO00429 736 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 BMP8BP34820 402 aa14.81□□□□□ -0.04
SMCO4-202ENST00000525141 OAZ1P54368 228 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms