RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ELOA2Q8IYF1 753 aaPredicted RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 TRIM44Q96DX7 344 aaPredicted RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ZBED3Q96IU2 234 aaPredicted RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ANO10Q9NW15 660 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 PCDHAC2Q9Y5I4 1007 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 FRMPD2Q68DX3 1309 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 FAM237AA0A1B0GTK4 181 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 A0A1B0GVL5 298 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 WNT10BO00744 389 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 ZBTB5O15062 677 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 ZNF202O95125 648 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 GH2P01242 217 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 PFKFB1P16118 471 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 TPM4P67936 248 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 CAMK4Q16566 473 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 RESP18Q5W5W9 173 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 MICALL2Q8IY33 904 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 REXO1Q8N1G1 1221 aaKnown RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 ENGASEQ8NFI3 743 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 PIGSQ96S52 555 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 GREB1LQ9C091 1923 aaPredicted RBP11.38□□□□□ -0.59
VPS13B-212ENST00000524330 MYH4Q9Y623 1939 aa11.38□□□□□ -0.59
VPS13B-212ENST00000524330 F5H6K3 240 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 UBE2Q2LH0YL09 131 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 CYTH3O43739 400 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 GDF11O95390 407 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 BMP3P12645 472 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 LMOD1P29536 600 aaPredicted RBP11.37□□□□□ -0.59
VPS13B-212ENST00000524330 TOB1P50616 345 aaPredicted RBP11.37□□□□□ -0.59
VPS13B-212ENST00000524330 NDUFA8P51970 172 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 TYRO3Q06418 890 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 KLRC3Q07444 240 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 KIF4BQ2VIQ3 1234 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
VPS13B-212ENST00000524330 FAM160B2Q86V87 743 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 ADGRF4Q8IZF3 695 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 CUL5Q93034 780 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 TNFRSF25Q93038 417 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 UBA5Q9GZZ9 404 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 RBSNQ9H1K0 784 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 KCNH3Q9ULD8 1083 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 PCDHB6Q9Y5E3 794 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 PPP2R3BQ9Y5P8 575 aa11.37□□□□□ -0.59
VPS13B-212ENST00000524330 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
VPS13B-212ENST00000524330 ATP2C1P98194 919 aaPredicted RBP11.36□□□□□ -0.59
VPS13B-212ENST00000524330 RASSF7Q02833 373 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 SNW1Q13573 536 aaKnown RBP11.36□□□□□ -0.59
VPS13B-212ENST00000524330 RASA3Q14644 834 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 ZNF174Q15697 407 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 CEP57L1Q8IYX8 460 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 GPC2Q8N158 579 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 CNNM3Q8NE01 707 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 AMNQ9BXJ7 453 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 RAB34Q9BZG1 259 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 GOLPH3LQ9H4A5 285 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 JMJD4Q9H9V9 463 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 FBXO2Q9UK22 296 aaPredicted RBP11.36□□□□□ -0.59
VPS13B-212ENST00000524330 ZBTB21Q9ULJ3 1066 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 PCDHA6Q9UN73 950 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 PCDHA8Q9Y5H6 950 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 COL4A5P29400 1685 aa11.36□□□□□ -0.59
VPS13B-212ENST00000524330 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 BECN2A8MW95 431 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 SMC2O95347 1197 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 CAP2P40123 477 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 PRPHP41219 470 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 KCTD1Q719H9 257 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 MTMR8Q96EF0 704 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 FEZ1Q99689 392 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 ZNF341Q9BYN7 854 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 EHMT1Q9H9B1 1298 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 AS3MTQ9HBK9 375 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 SIPA1L1O43166 1804 aa11.35□□□□□ -0.59
VPS13B-212ENST00000524330 CTNND1O60716 968 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms