RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 ANKRD20A12PQ8NF67 263 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 SCFD2Q8WU76 684 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 INTS4Q96HW7 963 aaKnown RBP4.36□□□□□ -1.71
SREK1-206ENST00000519259 SDF4Q9BRK5 362 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
SREK1-206ENST00000519259 LMO7Q8WWI1 1683 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 LAD1O00515 517 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 USP2O75604 605 aaPredicted RBP4.36□□□□□ -1.71
SREK1-206ENST00000519259 RPS6KB1P23443 525 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 SFNP31947 248 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 TFDP1Q14186 410 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 DHX8Q14562 1220 aaKnown RBP4.36□□□□□ -1.71
SREK1-206ENST00000519259 GRM4Q14833 912 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 CPXCR1Q8N123 301 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 MOXD2PA6NHM9 499 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 SLC27A2O14975 620 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 CCND2P30279 289 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 LBX2Q6XYB7 198 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 ANP32BQ92688 251 aaKnown RBP4.36□□□□□ -1.71
SREK1-206ENST00000519259 TMEM47Q9BQJ4 181 aa4.36□□□□□ -1.71
SREK1-206ENST00000519259 B4E1Z4 1266 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 E7EWF7 191 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ASAP2O43150 1006 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 CNGA1P29973 690 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 INPP5BP32019 993 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 HMGCS2P54868 508 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SETQ01105 290 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 PLS1Q14651 629 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 MIGA2Q7L4E1 593 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 BRAPQ7Z569 592 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SLFN12Q8IYM2 578 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 KIFC2Q96AC6 838 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 RPAP3Q9H6T3 665 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 PNMA6FA0A0J9YX94 578 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 KIF28PB7ZC32 967 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 NOP56O00567 594 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 STK38Q15208 465 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 SCLT1Q96NL6 688 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SRRDQ9UH36 339 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 JAG2Q9Y219 1238 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 NDUFB10O96000 172 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 XRCC5P13010 732 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 PTPREP23469 700 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SEMA3FQ13275 785 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 VAT1LQ9HCJ6 419 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 CHD2O14647 1828 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 STK36Q9NRP7 1315 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 COL2A1P02458 1487 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 NR1I2O75469 434 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SMC2O95347 1197 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 GRK4P32298 578 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 PPP2R5AQ15172 486 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 NIPA1Q7RTP0 329 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SAPCD2Q86UD0 394 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SEPT1Q8WYJ6 367 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 TSEN34Q9BSV6 310 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 PUS7LQ9H0K6 701 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 GPCPD1Q9NPB8 672 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 GOLGA6L6A8MZA4 724 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 HOXA2O43364 376 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 GDF11O95390 407 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ITGBL1O95965 494 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 XRCC6P12956 609 aaKnown RBP eCLIP4.35□□□□□ -1.71
SREK1-206ENST00000519259 PSMC4P43686 418 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 LAMC2Q13753 1193 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 EPHA7Q15375 998 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 NECAB2Q7Z6G3 386 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 CDAN1Q8IWY9 1227 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SNCAIPQ9Y6H5 919 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 KCPQ6ZWJ8 1503 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SNED1Q8TER0 1413 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 KRT18P05783 430 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 HAND2P61296 217 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 CYP4F22Q6NT55 531 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 TIPINQ9BVW5 301 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 NT5C3AQ9H0P0 336 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 EXOC7Q9UPT5 735 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 JAK3P52333 1124 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ZYXQ15942 572 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 ARHGEF16Q5VV41 709 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 IFNL1Q8IU54 200 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SIRT2Q8IXJ6 389 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 TMEM87AQ8NBN3 555 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 TCP11Q8WWU5 503 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ALG1Q9BT22 464 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 CNTNAP1P78357 1384 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 DDTLA6NHG4 134 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 FIBPO43427 364 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 ZNF543Q08ER8 600 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 SKOR2Q2VWA4 1001 aaPredicted RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 RASAL3Q86YV0 1011 aa4.35□□□□□ -1.71
SREK1-206ENST00000519259 TLR7Q9NYK1 1049 aaKnown RBP4.35□□□□□ -1.71
SREK1-206ENST00000519259 ZBTB5O15062 677 aa4.34□□□□□ -1.71
SREK1-206ENST00000519259 GAS2O43903 313 aaKnown RBP4.34□□□□□ -1.71
SREK1-206ENST00000519259 ADCY3O60266 1144 aa4.34□□□□□ -1.71
SREK1-206ENST00000519259 EIF3JO75822 258 aaKnown RBP4.34□□□□□ -1.71
SREK1-206ENST00000519259 TGFB3P10600 412 aa4.34□□□□□ -1.71
SREK1-206ENST00000519259 RARBP10826 455 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms