RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	OLFML2B	Q68BL8	750 aa		28.53	■■■□□ 2.16
CNOT7-204	ENST00000518885	MMP19	Q99542	508 aa		28.53	■■■□□ 2.16
CNOT7-204	ENST00000518885	INCENP	Q9NQS7	918 aa		28.53	■■■□□ 2.16
CNOT7-204	ENST00000518885	ZNF214	Q9UL59	606 aa	Predicted RBP	28.53	■■■□□ 2.16
CNOT7-204	ENST00000518885	PDE4DIP	Q5VU43	2346 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	ATP2A1	O14983	1001 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	GSPT1	P15170	499 aa	Known RBP	28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	OAZ1	P54368	228 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	TRIM32	Q13049	653 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	CCDC178	Q5BJE1	867 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	IL17RB	Q9NRM6	502 aa		28.52	■■■□□ 2.16
CNOT7-204	ENST00000518885	TOP1	P11387	765 aa	Known RBP	28.51	■■■□□ 2.15
CNOT7-204	ENST00000518885	SNRNP48	Q6IEG0	339 aa	Known RBP	28.51	■■■□□ 2.15
CNOT7-204	ENST00000518885	TTC14	Q96N46	770 aa		28.51	■■■□□ 2.15
CNOT7-204	ENST00000518885	TMEM232	C9JQI7	657 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	MSC	O60682	206 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	PLA2G6	O60733	806 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	NOV	P48745	357 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	REPS2	Q8NFH8	660 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	DCAF4	Q8WV16	495 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	SLC38A10	Q9HBR0	1119 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	FBXO40	Q9UH90	709 aa		28.5	■■■□□ 2.15
CNOT7-204	ENST00000518885	NMT2	O60551	498 aa		28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	MCC	P23508	829 aa		28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	RCSD1	Q6JBY9	416 aa		28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	IQCA1	Q86XH1	822 aa		28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	CNNM2	Q9H8M5	875 aa		28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	MKI67	P46013	3256 aa	Known RBP	28.49	■■■□□ 2.15
CNOT7-204	ENST00000518885	NECAB2	Q7Z6G3	386 aa		28.48	■■■□□ 2.15
CNOT7-204	ENST00000518885	UBE2Q1	Q7Z7E8	422 aa		28.48	■■■□□ 2.15
CNOT7-204	ENST00000518885	TBC1D10C	Q8IV04	446 aa		28.48	■■■□□ 2.15
CNOT7-204	ENST00000518885	NPLOC4	Q8TAT6	608 aa		28.48	■■■□□ 2.15
CNOT7-204	ENST00000518885	CPXCR1	Q8N123	301 aa		28.47	■■■□□ 2.15
CNOT7-204	ENST00000518885	KRT23	Q9C075	422 aa		28.47	■■■□□ 2.15
CNOT7-204	ENST00000518885	DIS3	Q9Y2L1	958 aa	Known RBP	28.47	■■■□□ 2.15
CNOT7-204	ENST00000518885	COL11A1	P12107	1806 aa	Predicted RBP	28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	CCDC96	Q2M329	555 aa		28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	DPF3	Q92784	378 aa		28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	FLRT1	Q9NZU1	646 aa		28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	OGDHL	Q9ULD0	1010 aa		28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	TACC3	Q9Y6A5	838 aa		28.46	■■■□□ 2.15
CNOT7-204	ENST00000518885	CHML	P26374	656 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	CNGA1	P29973	690 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	CHST13	Q8NET6	341 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	DDX11	Q96FC9	970 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	TMEM47	Q9BQJ4	181 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	NBPF3	Q9H094	633 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	LAMA4	Q16363	1823 aa		28.45	■■■□□ 2.14
CNOT7-204	ENST00000518885	COBL	O75128	1261 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	CCND3	P30281	292 aa	Predicted RBP	28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	CYP2C19	P33261	490 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	SLC4A3	P48751	1232 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	KCTD1	Q719H9	257 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	DGKH	Q86XP1	1220 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	MAML3	Q96JK9	1138 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	RAVER2	Q9HCJ3	691 aa	Known RBP	28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	NRBP1	Q9UHY1	535 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	MTMR7	Q9Y216	660 aa		28.44	■■■□□ 2.14
CNOT7-204	ENST00000518885	TKFC	Q3LXA3	575 aa		28.43	■■■□□ 2.14
CNOT7-204	ENST00000518885	NR2E3	Q9Y5X4	410 aa		28.43	■■■□□ 2.14
CNOT7-204	ENST00000518885	NEDD4	P46934	1319 aa		28.43	■■■□□ 2.14
CNOT7-204	ENST00000518885	TRDN	Q13061	729 aa		28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	ANKRD35	Q8N283	1001 aa		28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	MSL3	Q8N5Y2	521 aa	Known RBP	28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	PAWR	Q96IZ0	340 aa	Known RBP	28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	DDX20	Q9UHI6	824 aa	Known RBP	28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	PNMA2	Q9UL42	364 aa		28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885		U3KPZ7	1027 aa	Predicted RBP	28.42	■■■□□ 2.14
CNOT7-204	ENST00000518885	KDM4A	O75164	1064 aa		28.41	■■■□□ 2.14
CNOT7-204	ENST00000518885	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	28.41	■■■□□ 2.14
CNOT7-204	ENST00000518885	IGHA2	P01877	340 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	PGK2	P07205	417 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	CYBA	P13498	195 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	ZNF792	Q3KQV3	632 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	UBAC1	Q9BSL1	405 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	ACAD9	Q9H845	621 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	PRR12	Q9ULL5	1215 aa		28.4	■■■□□ 2.14
CNOT7-204	ENST00000518885	LHX8	Q68G74	356 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	CHMP4C	Q96CF2	233 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	TINF2	Q9BSI4	451 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	C11orf49	Q9H6J7	331 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	KAT14	Q9H8E8	782 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	CNPY2	Q9Y2B0	182 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885	RIPK3	Q9Y572	518 aa		28.39	■■■□□ 2.14
CNOT7-204	ENST00000518885		B4E1Z4	1266 aa		28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	SEPT4	O43236	478 aa		28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	NEFL	P07196	543 aa		28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	GPATCH4	Q5T3I0	446 aa	Known RBP	28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	BTNL9	Q6UXG8	535 aa		28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	KIAA1211	Q6ZU35	1233 aa		28.38	■■■□□ 2.13
CNOT7-204	ENST00000518885	SGSM2	O43147	1006 aa		28.37	■■■□□ 2.13
CNOT7-204	ENST00000518885	EVI5	O60447	810 aa		28.37	■■■□□ 2.13
CNOT7-204	ENST00000518885	SYDE2	Q5VT97	1194 aa		28.37	■■■□□ 2.13
CNOT7-204	ENST00000518885	ZNF467	Q7Z7K2	595 aa	Predicted RBP	28.37	■■■□□ 2.13
CNOT7-204	ENST00000518885	HOMER2	Q9NSB8	354 aa		28.37	■■■□□ 2.13
CNOT7-204	ENST00000518885	PDHB	P11177	359 aa		28.36	■■■□□ 2.13
CNOT7-204	ENST00000518885	ARRDC4	Q8NCT1	418 aa		28.36	■■■□□ 2.13
CNOT7-204	ENST00000518885	ZKSCAN3	Q9BRR0	538 aa		28.36	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms