RNA–Protein interactions for RNA: ENST00000518692.1

SPIDR-207, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 726 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-207ENST00000518692 ATN1P54259 1190 aaPredicted RBP20.79■□□□□ 0.92
SPIDR-207ENST00000518692 KCTD2Q14681 263 aa20.79■□□□□ 0.92
SPIDR-207ENST00000518692 SLFN13Q68D06 897 aa20.79■□□□□ 0.92
SPIDR-207ENST00000518692 GMCL1P1Q8NEA9 526 aa20.79■□□□□ 0.92
SPIDR-207ENST00000518692 KIFC2Q96AC6 838 aa20.79■□□□□ 0.92
SPIDR-207ENST00000518692 TEX13BQ9BXU2 312 aa20.79■□□□□ 0.92
SPIDR-207ENST00000518692 A0A0D9SFI3 127 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 SLC3A2P08195 630 aaKnown RBP20.78■□□□□ 0.92
SPIDR-207ENST00000518692 CPXCR1Q8N123 301 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 CHMP4CQ96CF2 233 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 TINF2Q9BSI4 451 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 SLC38A10Q9HBR0 1119 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
SPIDR-207ENST00000518692 IL17RBQ9NRM6 502 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 SYNPO2Q9UMS6 1093 aa20.78■□□□□ 0.92
SPIDR-207ENST00000518692 DIS3Q9Y2L1 958 aaKnown RBP20.78■□□□□ 0.92
SPIDR-207ENST00000518692 ATP2A1O14983 1001 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 NMT2O60551 498 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 IGHDP01880 384 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 COPB2P35606 906 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 SLC4A3P48751 1232 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 SMC5Q8IY18 1101 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 LRCH3Q96II8 777 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 HELLSQ9NRZ9 838 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 FEM1BQ9UK73 627 aa20.77■□□□□ 0.92
SPIDR-207ENST00000518692 ZBED4O75132 1171 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 ZNF865P0CJ78 1059 aaPredicted RBP20.76■□□□□ 0.91
SPIDR-207ENST00000518692 BMP3P12645 472 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 LRRC41Q15345 812 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 B4GALNT3Q6L9W6 998 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 RASGRP2Q7LDG7 609 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 ARRDC4Q8NCT1 418 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 ANAPC4Q9UJX5 808 aa20.76■□□□□ 0.91
SPIDR-207ENST00000518692 DNAJC25-GNG10A0A024R161 153 aa20.75■□□□□ 0.91
SPIDR-207ENST00000518692 MYCNP04198 464 aaPredicted RBP20.75■□□□□ 0.91
SPIDR-207ENST00000518692 ALX1Q15699 326 aa20.75■□□□□ 0.91
SPIDR-207ENST00000518692 ZNF589Q86UQ0 364 aaPredicted RBP20.75■□□□□ 0.91
SPIDR-207ENST00000518692 EXOC6Q8TAG9 804 aa20.75■□□□□ 0.91
SPIDR-207ENST00000518692 NRBP1Q9UHY1 535 aa20.75■□□□□ 0.91
SPIDR-207ENST00000518692 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 TMEM232C9JQI7 657 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 MCCP23508 829 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 RTP1P59025 263 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
SPIDR-207ENST00000518692 NMIQ13287 307 aaPredicted RBP20.74■□□□□ 0.91
SPIDR-207ENST00000518692 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 LENG1Q96BZ8 264 aaPredicted RBP20.74■□□□□ 0.91
SPIDR-207ENST00000518692 FGD4Q96M96 766 aa20.74■□□□□ 0.91
SPIDR-207ENST00000518692 KBTBD13C9JR72 458 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 SNAI1O95863 264 aaPredicted RBP20.73■□□□□ 0.91
SPIDR-207ENST00000518692 FGAP02671 866 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 FGRP09769 529 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 ADCYAP1R1P41586 468 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 NOVP48745 357 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 SLC39A5Q6ZMH5 540 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.73■□□□□ 0.91
SPIDR-207ENST00000518692 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 GMCL1Q96IK5 515 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 UBE2OQ9C0C9 1292 aaKnown RBP20.73■□□□□ 0.91
SPIDR-207ENST00000518692 STX8Q9UNK0 236 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 MCM3APO60318 1980 aa20.73■□□□□ 0.91
SPIDR-207ENST00000518692 ORC4O43929 436 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 RANBP6O60518 1105 aaKnown RBP20.72■□□□□ 0.91
SPIDR-207ENST00000518692 PGK1P00558 417 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
SPIDR-207ENST00000518692 SLC1A4P43007 532 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 AAMPQ13685 434 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 FERMT2Q96AC1 680 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-207ENST00000518692 XPNPEP3Q9NQH7 507 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 ISY1Q9ULR0 285 aaKnown RBP20.72■□□□□ 0.91
SPIDR-207ENST00000518692 CTDP1Q9Y5B0 961 aaPredicted RBP20.72■□□□□ 0.91
SPIDR-207ENST00000518692 ZNF536O15090 1300 aa20.72■□□□□ 0.91
SPIDR-207ENST00000518692 LTBP2Q14767 1821 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 TRIM6-TRIM34B2RNG4 842 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 RARBP10826 455 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 STAT2P52630 851 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 OAZ1P54368 228 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 SNAP25P60880 206 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 SNX17Q15036 470 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 MAMDC4Q6UXC1 1216 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 KCTD1Q719H9 257 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 CHD1LQ86WJ1 897 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 TDHQ8IZJ6 230 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 STAG1Q8WVM7 1258 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 RILPL2Q969X0 211 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 ATP11BQ9Y2G3 1177 aa20.71■□□□□ 0.91
SPIDR-207ENST00000518692 NUCB1Q02818 461 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 TRIM60Q495X7 471 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 ANKRD35Q8N283 1001 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 MSL3Q8N5Y2 521 aaKnown RBP20.7■□□□□ 0.9
SPIDR-207ENST00000518692 CHST13Q8NET6 341 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 AGBL1Q96MI9 1066 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 HOMER2Q9NSB8 354 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 MTMR7Q9Y216 660 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 SYNGAP1Q96PV0 1343 aa20.7■□□□□ 0.9
SPIDR-207ENST00000518692 ADAMTS4O75173 837 aa20.69■□□□□ 0.9
SPIDR-207ENST00000518692 AKR1A1P14550 325 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms