RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 RAVER2Q9HCJ3 691 aaKnown RBP20.61■□□□□ 0.89
CTNNA1-206ENST00000517980 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
CTNNA1-206ENST00000517980 ZBED4O75132 1171 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 PDE4BQ07343 736 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 PPARAQ07869 468 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 NEDD1Q8NHV4 660 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 DDX11Q96FC9 970 aa20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
CTNNA1-206ENST00000517980 SALL3Q9BXA9 1300 aa20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 TTLL1O95922 423 aa20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 PGK1P00558 417 aa20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 TEX13BQ9BXU2 312 aa20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 DIS3Q9Y2L1 958 aaKnown RBP20.59■□□□□ 0.89
CTNNA1-206ENST00000517980 MCM3APO60318 1980 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 FOXP2O15409 715 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 ZNF865P0CJ78 1059 aaPredicted RBP20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 VPS53Q5VIR6 699 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 Q7L0L9 218 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 LENG1Q96BZ8 264 aaPredicted RBP20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 LBHD1Q9BQE6 289 aaPredicted RBP20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 FEM1BQ9UK73 627 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 TACC3Q9Y6A5 838 aa20.58■□□□□ 0.89
CTNNA1-206ENST00000517980 SLC3A2P08195 630 aaKnown RBP20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 RARBP10826 455 aa20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 COPB2P35606 906 aa20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 LRIT3Q3SXY7 679 aa20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 TRIM60Q495X7 471 aa20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 XPNPEP3Q9NQH7 507 aa20.57■□□□□ 0.88
CTNNA1-206ENST00000517980 TMEM232C9JQI7 657 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 SNAI1O95863 264 aaPredicted RBP20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 BMP3P12645 472 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 PDE1AP54750 535 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 PRDM5Q9NQX1 630 aaPredicted RBP20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 PRKAG2Q9UGJ0 569 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 MTMR7Q9Y216 660 aa20.56■□□□□ 0.88
CTNNA1-206ENST00000517980 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 NMT2O60551 498 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 MCCP23508 829 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 SNAP25P60880 206 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 SH3RF1Q7Z6J0 888 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 DEFB123Q8N688 67 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 GMCL1P1Q8NEA9 526 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 HOMER2Q9NSB8 354 aa20.55■□□□□ 0.88
CTNNA1-206ENST00000517980 ATP2A1O14983 1001 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 ANKRD35Q8N283 1001 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 EVI5LQ96CN4 794 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 FAM227BQ96M60 508 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 NRBP1Q9UHY1 535 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
CTNNA1-206ENST00000517980 TSPY2A6NKD2 308 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 IRX5P78411 483 aaPredicted RBP20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 TLE2Q04725 743 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 IKQ13123 557 aaPredicted RBP20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 B4GALNT3Q6L9W6 998 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 KCTD1Q719H9 257 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 RASGRP2Q7LDG7 609 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 RNF180Q86T96 592 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 AGBL1Q96MI9 1066 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 LNPKQ9C0E8 428 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 ZHX1Q9UKY1 873 aaPredicted RBP20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 PHF24Q9UPV7 400 aa20.53■□□□□ 0.88
CTNNA1-206ENST00000517980 TRIM43BA6NCK2 446 aa20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 AKR1A1P14550 325 aa20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 STAG1Q8WVM7 1258 aa20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 BADQ92934 168 aa20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 TRIM43Q96BQ3 446 aaPredicted RBP20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 FAM184BQ9ULE4 1060 aa20.52■□□□□ 0.88
CTNNA1-206ENST00000517980 COL6A3P12111 3177 aa20.52■□□□□ 0.87
CTNNA1-206ENST00000517980 PLIN4Q96Q06 1357 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 SLC1A4P43007 532 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 STAT2P52630 851 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 CNTN2Q02246 1040 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 SNX17Q15036 470 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 CHST13Q8NET6 341 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 CHURC1Q8WUH1 139 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 FGD4Q96M96 766 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 HELLSQ9NRZ9 838 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 SYNPO2Q9UMS6 1093 aa20.51■□□□□ 0.87
CTNNA1-206ENST00000517980 A0A0D9SFI3 127 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 TRIM6-TRIM34B2RNG4 842 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 FGAP02671 866 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 SHHQ15465 462 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 RRP12Q5JTH9 1297 aaKnown RBP20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 RCSD1Q6JBY9 416 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 GPR153Q6NV75 609 aa20.5■□□□□ 0.87
CTNNA1-206ENST00000517980 CCDC174Q6PII3 467 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms