RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MRPS5P82675 430 aaKnown RBP12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 PDE4BQ07343 736 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 ADGRE1Q14246 886 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 GRB14Q14449 540 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 NAV1Q8NEY1 1877 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 MROH8Q9H579 483 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 ZNF576Q9H609 170 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 EPHX3Q9H6B9 360 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 C11orf16Q9NQ32 467 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 ADAMTS5Q9UNA0 930 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 RLFQ13129 1914 aa12.58□□□□□ -0.4
PDGFRB-203ENST00000517660 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 F5H6K3 240 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 IGHDP01880 384 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 BMP1P13497 986 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 ERCC3P19447 782 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 KLRC3Q07444 240 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 PPARAQ07869 468 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 PLS1Q14651 629 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 SNX17Q15036 470 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 AKNAD1Q5T1N1 836 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 B4GALNT3Q6L9W6 998 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 SLC39A5Q6ZMH5 540 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 CCDC129Q6ZRS4 1044 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 DPP9Q86TI2 863 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 TRPV1Q8NER1 839 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 NEDD1Q8NHV4 660 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 MKL1Q969V6 931 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 PRDM5Q9NQX1 630 aaPredicted RBP12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 SLC5A4Q9NY91 659 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 SYNPO2Q9UMS6 1093 aa12.57□□□□□ -0.4
PDGFRB-203ENST00000517660 DNM1LO00429 736 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 SLC25A27O95847 323 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 IGHA2P01877 340 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 ADORA2AP29274 412 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 TFAP4Q01664 338 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 NUCB1Q02818 461 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 TMEM132BQ14DG7 1078 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 ALX1Q15699 326 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 MCMDC2Q4G0Z9 681 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 CHD1LQ86WJ1 897 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 NCAPG2Q86XI2 1143 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 FBXO28Q9NVF7 368 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 HCN4Q9Y3Q4 1203 aa12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
PDGFRB-203ENST00000517660 VWA5AO00534 786 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 FOXP2O15409 715 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 TTLL1O95922 423 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 NDUFB10O96000 172 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 STAT3P40763 770 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 GJC2Q5T442 439 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 KHSRPQ92945 711 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 CEP95Q96GE4 821 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 OSBPL3Q9H4L5 887 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 PRDM12Q9H4Q4 367 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
PDGFRB-203ENST00000517660 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 COBLO75128 1261 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 FCER1AP12319 257 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 COPB2P35606 906 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 PBX2P40425 430 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 FAM47AQ5JRC9 791 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 OLFML2BQ68BL8 750 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 RIOX2Q8IUF8 465 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 PLEKHM2Q8IWE5 1019 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 RILPL2Q969X0 211 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 TIFAQ96CG3 184 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 NUP88Q99567 741 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDGFRB-203ENST00000517660 BAZ2AQ9UIF9 1905 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 MSCO60682 206 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 ZBED4O75132 1171 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 CYP2C19P33261 490 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 TFF2Q03403 129 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 CTDSPL2Q05D32 466 aa12.53□□□□□ -0.4
PDGFRB-203ENST00000517660 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms