RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 CLGNO14967 610 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 KCNQ4P56696 695 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 ATP11AP98196 1134 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 SEPT6Q14141 434 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 HADHQ16836 314 aaKnown RBP12.13□□□□□ -0.47
TRIM41-209ENST00000515834 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
TRIM41-209ENST00000515834 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 DACT3Q96B18 629 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 TXNDC9O14530 226 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 VPS41P49754 854 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 KRT33BQ14525 404 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 CEP120Q8N960 986 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 NCAPGQ9BPX3 1015 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 PANK4Q9NVE7 773 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 CASP2P42575 452 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 MAGEA1P43355 309 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 C1orf228Q6PIY5 440 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 GCNAQ96QF7 691 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 MOSPD1Q9UJG1 213 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 S100BP04271 92 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 TFDP1Q14186 410 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 PDZD4Q76G19 769 aaPredicted RBP12.12□□□□□ -0.47
TRIM41-209ENST00000515834 PTPREP23469 700 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 POSTNQ15063 836 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 SYCE1Q8N0S2 351 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF653Q96CK0 615 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 SMYD2Q9NRG4 433 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
TRIM41-209ENST00000515834 USP19O94966 1318 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 KRT40Q6A162 431 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 TRMT44Q8IYL2 757 aaKnown RBP12.11□□□□□ -0.47
TRIM41-209ENST00000515834 HDAC11Q96DB2 347 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
TRIM41-209ENST00000515834 CYP4A11Q02928 519 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
TRIM41-209ENST00000515834 SNX25Q9H3E2 840 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 A6NJR5 290 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 INO80B-WBP1J3KQ70 363 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 ELF1P32519 619 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF449Q6P9G9 518 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 INO80BQ9C086 356 aaPredicted RBP12.11□□□□□ -0.47
TRIM41-209ENST00000515834 ANGPTL3Q9Y5C1 460 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 PDE6CP51160 858 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 HDXQ7Z353 690 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 GDF11O95390 407 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 MYL3P08590 195 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF202O95125 648 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 ATL3Q6DD88 541 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 TTBK2Q6IQ55 1244 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 ECE1P42892 770 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 ANKRD42Q8N9B4 389 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 IPO11Q9UI26 975 aaKnown RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 CPSF3Q9UKF6 684 aaKnown RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 FANCCQ00597 558 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 IL1RL1Q01638 556 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 CHRNDQ07001 517 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 GBP6Q6ZN66 633 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 ZNF654Q8IZM8 581 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 SBNO1A3KN83 1393 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 POLR2BP30876 1174 aaKnown RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 EVCP57679 992 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
TRIM41-209ENST00000515834 MCUQ8NE86 351 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
TRIM41-209ENST00000515834 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms