RNA–Protein interactions for RNA: ENST00000515746.5

ATXN3-212, Transcript of ataxin 3, human

TSL 5

Gene ATXN3, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-212	ENST00000515746	MAGEB6P1	A0A0J9YX57	407 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746		A0A0U1RQG5	324 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	POM121C	A8CG34	1229 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	BTBD18	B2RXH4	712 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746		B4E1Z4	1266 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	AKR1B15	C9JRZ8	316 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	RXRA	P19793	462 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	FGFR2	P21802	821 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ARID4A	P29374	1257 aa	Predicted RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	GUCY1A2	P33402	732 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	IARS	P41252	1262 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ARHGAP25	P42331	645 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ADK	P55263	362 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	CHMP4BP1	P59074	171 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	TUBB4B	P68371	445 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	SSRP1	Q08945	709 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	RAD51AP2	Q09MP3	1159 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	TRDN	Q13061	729 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	KARS	Q15046	597 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ZNF827	Q17R98	1081 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	CCDC57	Q2TAC2	916 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	SPATA1	Q5VX52	437 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	KANK3	Q6NY19	840 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	TRMT44	Q8IYL2	757 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	GRAMD1C	Q8IYS0	662 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	WASF1	Q92558	559 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	SHISA4	Q96DD7	197 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	CCDC51	Q96ER9	411 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	PNKP	Q96T60	521 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	OCSTAMP	Q9BR26	566 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	MTA3	Q9BTC8	594 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	NAA15	Q9BXJ9	866 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	SAMSN1	Q9NSI8	373 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ADD3	Q9UEY8	706 aa	Known RBP	5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	WWC3	Q9ULE0	1092 aa		5.65	□□□□□ -1.5
ATXN3-212	ENST00000515746	ITIH6	Q6UXX5	1313 aa		5.65	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF532	Q9HCE3	1301 aa		5.65	□□□□□ -1.51
ATXN3-212	ENST00000515746	SETD1B	Q9UPS6	1966 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746		A0A087X0B3	334 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746		A0A0U1RQJ8	604 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	LRRC10B	A6NIK2	292 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	SOWAHD	A6NJG2	315 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	POLR2D	O15514	142 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	TEX33	O43247	280 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	MFAP3L	O75121	409 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	CCDC175	P0C221	793 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	SKOR1	P84550	965 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	AMPD2	Q01433	879 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	RBL2	Q08999	1139 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	DPYD	Q12882	1025 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	GPS2	Q13227	327 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	IFIT5	Q13325	482 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	TRIM29	Q14134	588 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	TTF1	Q15361	905 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	WHAMMP3	Q1A5X7	153 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	C4orf48	Q5BLP8	95 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	RILPL1	Q5EBL4	403 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	METTL24	Q5JXM2	366 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	SPRYD7	Q5W111	196 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	USP49	Q70CQ1	688 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	MICU3	Q86XE3	530 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	DIS3L2	Q8IYB7	885 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	PDILT	Q8N807	584 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	CEP112	Q8N8E3	955 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	GOLGA5	Q8TBA6	731 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	ADAM32	Q8TC27	787 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	STAG1	Q8WVM7	1258 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	ATRIP	Q8WXE1	791 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	PAGE5	Q96GU1	130 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYL10	Q9BUA6	226 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	SLC26A6	Q9BXS9	759 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	IRX2	Q9BZI1	471 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	ALG2	Q9H553	416 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	INCENP	Q9NQS7	918 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	STRN4	Q9NRL3	753 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	LIMA1	Q9UHB6	759 aa	Known RBP	5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	L1RE1	Q9UN81	338 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	PCDHB6	Q9Y5E3	794 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	PCDH11X	Q9BZA7	1347 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	PCDH11Y	Q9BZA8	1340 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	ECM29	Q5VYK3	1845 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	DISP2	A7MBM2	1401 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	DCC	P43146	1447 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	AKAP11	Q9UKA4	1901 aa		5.64	□□□□□ -1.51
ATXN3-212	ENST00000515746	COL22A1	Q8NFW1	1626 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	GSG1L2	A8MUP6	293 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	PATL2	C9JE40	543 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	IFIT3	O14879	490 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	KIF5C	O60282	957 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	DEXI	O95424	95 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	GYPC	P04921	128 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	TUBB	P07437	444 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	UQCRFS1P1	P0C7P4	283 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CSB-PGBD3	P0DP91	1061 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	VARS	P26640	1264 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	ACTN2	P35609	894 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SOX11	P35716	441 aa		5.63	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms