RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TRIB2Q92519 343 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 KRT23Q9C075 422 aa15.07■□□□□ 0
CLCN3-210ENST00000515420 PAK6Q9NQU5 681 aaPredicted RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
CLCN3-210ENST00000515420 STAT3P40763 770 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 MAP3K21Q5TCX8 1036 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 ERICH6BQ5W0A0 696 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 RCSD1Q6JBY9 416 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.06■□□□□ 0
CLCN3-210ENST00000515420 IQCA1Q86XH1 822 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 DGKHQ86XP1 1220 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 DCAF4Q8WV16 495 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 TEX13BQ9BXU2 312 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 UNC93B1Q9H1C4 597 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 SLC38A10Q9HBR0 1119 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 SLC5A4Q9NY91 659 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CLCN3-210ENST00000515420 RPTORQ8N122 1335 aa15.06■□□□□ 0
CLCN3-210ENST00000515420 PDE4DIPQ5VU43 2346 aa15.05■□□□□ 0
CLCN3-210ENST00000515420 TMEM232C9JQI7 657 aa15.05■□□□□ -0
CLCN3-210ENST00000515420 ZBED4O75132 1171 aa15.05■□□□□ -0
CLCN3-210ENST00000515420 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
CLCN3-210ENST00000515420 EN2P19622 333 aaPredicted RBP15.05■□□□□ -0
CLCN3-210ENST00000515420 ADORA2AP29274 412 aa15.05■□□□□ -0
CLCN3-210ENST00000515420 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
CLCN3-210ENST00000515420 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
CLCN3-210ENST00000515420 TMEM47Q9BQJ4 181 aa15.05■□□□□ -0
CLCN3-210ENST00000515420 PLXNA1Q9UIW2 1896 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 KDM4AO75164 1064 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 MYCP01106 439 aaPredicted RBP15.04■□□□□ -0
CLCN3-210ENST00000515420 IGHA2P01877 340 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 FCER1AP12319 257 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 MCCP23508 829 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 U2AF1L4Q8WU68 220 aaKnown RBP15.04■□□□□ -0
CLCN3-210ENST00000515420 ANKS1AQ92625 1134 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 MAP4K1Q92918 833 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 KIFC2Q96AC6 838 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 SHISA4Q96DD7 197 aa15.04■□□□□ -0
CLCN3-210ENST00000515420 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -0
CLCN3-210ENST00000515420 HMX1Q9NP08 348 aaPredicted RBP15.04■□□□□ -0
CLCN3-210ENST00000515420 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
CLCN3-210ENST00000515420 SGPL1O95470 568 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 SNHG28P0DPA3 235 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
CLCN3-210ENST00000515420 PTH1RQ03431 593 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 SNRNP48Q6IEG0 339 aaKnown RBP15.03■□□□□ -0
CLCN3-210ENST00000515420 BTNL9Q6UXG8 535 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 DPP9Q86TI2 863 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 FBXO40Q9UH90 709 aa15.03■□□□□ -0
CLCN3-210ENST00000515420 B4E1Z4 1266 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 CYP21A2P08686 494 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 PDHBP11177 359 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 CACNB2Q08289 660 aaPredicted RBP15.02■□□□□ -0
CLCN3-210ENST00000515420 TRDNQ13061 729 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 IKQ13123 557 aaPredicted RBP15.02■□□□□ -0
CLCN3-210ENST00000515420 KCTD2Q14681 263 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 CCL14Q16627 93 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 KIAA1211Q6ZU35 1233 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 KCTD1Q719H9 257 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 CHST13Q8NET6 341 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 NPLOC4Q8TAT6 608 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02■□□□□ -0
CLCN3-210ENST00000515420 ESYT1Q9BSJ8 1104 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 CRISPLD2Q9H0B8 497 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 ZSWIM5Q9P217 1185 aa15.02■□□□□ -0
CLCN3-210ENST00000515420 DIS3Q9Y2L1 958 aaKnown RBP15.02■□□□□ -0
CLCN3-210ENST00000515420 COBLO75128 1261 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 TRIM32Q13049 653 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 CCDC96Q2M329 555 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 TKFCQ3LXA3 575 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 GPATCH4Q5T3I0 446 aaKnown RBP15.01□□□□□ -0.01
CLCN3-210ENST00000515420 CASC1Q6TDU7 716 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 DEFB118Q96PH6 123 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 MMP19Q99542 508 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 UBAC1Q9BSL1 405 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 FLRT1Q9NZU1 646 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 PNMA2Q9UL42 364 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
CLCN3-210ENST00000515420 FRMPD3Q5JV73 1810 aa15.01□□□□□ -0.01
CLCN3-210ENST00000515420 TNKSO95271 1327 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 ZNF543Q08ER8 600 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 UBE2Q1Q7Z7E8 422 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 CPXCR1Q8N123 301 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 ENAHQ8N8S7 591 aaPredicted RBP15□□□□□ -0.01
CLCN3-210ENST00000515420 ANKLE1Q8NAG6 615 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 PNMA1Q8ND90 353 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 ZKSCAN3Q9BRR0 538 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 LSG1Q9H089 658 aaKnown RBP15□□□□□ -0.01
CLCN3-210ENST00000515420 KAT14Q9H8E8 782 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 RAVER2Q9HCJ3 691 aaKnown RBP15□□□□□ -0.01
CLCN3-210ENST00000515420 NRBP1Q9UHY1 535 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 PRR12Q9ULL5 1215 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 RIPK3Q9Y572 518 aa15□□□□□ -0.01
CLCN3-210ENST00000515420 RBM8AQ9Y5S9 174 aaKnown RBP15□□□□□ -0.01
CLCN3-210ENST00000515420 ZNF536O15090 1300 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 MSCO60682 206 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 CDC45O75419 566 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms