RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PPP1R9AQ9ULJ8 1098 aa23.02■■□□□ 1.28
HMGCS1-206ENST00000511774 MOXD2PA6NHM9 499 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 EEF2P13639 858 aaKnown RBP23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 PLA2G5P39877 138 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 PPIGQ13427 754 aaKnown RBP eCLIP23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 NUP133Q8WUM0 1156 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 UHRF1Q96T88 793 aaPredicted RBP23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 CXXC1Q9P0U4 656 aaPredicted RBP23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 SWAP70Q9UH65 585 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 CNPY2Q9Y2B0 182 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 EXOC6BQ9Y2D4 811 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 RIPK3Q9Y572 518 aa23.01■■□□□ 1.27
HMGCS1-206ENST00000511774 CHGBP05060 677 aa23■■□□□ 1.27
HMGCS1-206ENST00000511774 CDK8P49336 464 aa23■■□□□ 1.27
HMGCS1-206ENST00000511774 FAM83BQ5T0W9 1011 aa23■■□□□ 1.27
HMGCS1-206ENST00000511774 FGD4Q96M96 766 aa23■■□□□ 1.27
HMGCS1-206ENST00000511774 PPP1R12CQ9BZL4 782 aa23■■□□□ 1.27
HMGCS1-206ENST00000511774 YBX2Q9Y2T7 364 aaKnown RBP23■■□□□ 1.27
HMGCS1-206ENST00000511774 GREB1LQ9C091 1923 aaPredicted RBP23■■□□□ 1.27
HMGCS1-206ENST00000511774 DNAJC25-GNG10A0A024R161 153 aa22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 RLBP1P12271 317 aa22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 CST5P28325 142 aaPredicted RBP22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 MRPS5P82675 430 aaKnown RBP22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 NKX2-4Q9H2Z4 354 aa22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 SH2D4AQ9H788 454 aa22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 ZHX1Q9UKY1 873 aaPredicted RBP22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 FAM184BQ9ULE4 1060 aa22.99■■□□□ 1.27
HMGCS1-206ENST00000511774 CTAGE5O15320 804 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 DUSP11O75319 330 aaKnown RBP22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 ASGR1P07306 291 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 CYP2C18P33260 490 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 MAMDC4Q6UXC1 1216 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 FAM126BQ8IXS8 530 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 NUP88Q99567 741 aaPredicted RBP22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 IL1RAPL2Q9NP60 686 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 ELP1O95163 1332 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 SYNGAP1Q96PV0 1343 aa22.98■■□□□ 1.27
HMGCS1-206ENST00000511774 PRRC2BQ5JSZ5 2229 aaKnown RBP22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 GOLIM4O00461 696 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 IGFBP4P22692 258 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 C12orf60Q5U649 245 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 ZKSCAN2Q63HK3 967 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 CEP85Q6P2H3 762 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 UPF3AQ9H1J1 476 aaKnown RBP22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 UMODL1Q5DID0 1318 aa22.97■■□□□ 1.27
HMGCS1-206ENST00000511774 ARVCFO00192 962 aa22.96■■□□□ 1.27
HMGCS1-206ENST00000511774 C6orf222P0C671 652 aaPredicted RBP22.96■■□□□ 1.27
HMGCS1-206ENST00000511774 TTF1Q15361 905 aaPredicted RBP22.96■■□□□ 1.27
HMGCS1-206ENST00000511774 CCDC17Q96LX7 622 aa22.96■■□□□ 1.27
HMGCS1-206ENST00000511774 GLT1D1Q96MS3 346 aa22.96■■□□□ 1.27
HMGCS1-206ENST00000511774 MBD4O95243 580 aa22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 CD4P01730 458 aa22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 SNRNP48Q6IEG0 339 aaKnown RBP22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 C16orf86Q6ZW13 317 aa22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 TMEM199Q8N511 208 aa22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 MSL3Q8N5Y2 521 aaKnown RBP22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 HERVK_113Q902F9 699 aa22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 DNAJC2Q99543 621 aaKnown RBP22.95■■□□□ 1.26
HMGCS1-206ENST00000511774 MROH7Q68CQ1 1323 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 A0A0U1RQG5 324 aaPredicted RBP22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 USP17L12C9JPN9 530 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 USP17L21D6R901 530 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 RAD21O60216 631 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 GJA9P57773 515 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 TFF2Q03403 129 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 ACVR2BQ13705 512 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 CCDC144BQ3MJ40 725 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 PSRC1Q6PGN9 363 aaPredicted RBP22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 VWCEQ96DN2 955 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 IL23AQ9NPF7 189 aa22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.94■■□□□ 1.26
HMGCS1-206ENST00000511774 ASTN1O14525 1302 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 BMP1P13497 986 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 PTGS1P23219 599 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 COPB2P35606 906 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 RABGGTBP53611 331 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 VTI1AQ96AJ9 217 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 FAM122AQ96E09 287 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 TEX13BQ9BXU2 312 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 KATNBL1Q9H079 304 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 KANSL2Q9H9L4 492 aa22.93■■□□□ 1.26
HMGCS1-206ENST00000511774 MYH7P12883 1935 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 MYOGP15173 224 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 BEX3Q00994 111 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 RAB30Q15771 203 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 GNASQ5JWF2 1037 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 CCDC174Q6PII3 467 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 ITPRIPQ8IWB1 547 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 DDX11Q96FC9 970 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 SLF1Q9BQI6 1058 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 GOPCQ9HD26 462 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 ATP8A2Q9NTI2 1148 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 MSRAQ9UJ68 235 aa22.92■■□□□ 1.26
HMGCS1-206ENST00000511774 APBB1O00213 710 aa22.91■■□□□ 1.26
HMGCS1-206ENST00000511774 ADD2P35612 726 aa22.91■■□□□ 1.26
HMGCS1-206ENST00000511774 PCSK9Q8NBP7 692 aaKnown RBP22.91■■□□□ 1.26
HMGCS1-206ENST00000511774 RHPN1Q8TCX5 695 aa22.91■■□□□ 1.26
HMGCS1-206ENST00000511774 MYH4Q9Y623 1939 aa22.9■■□□□ 1.26
HMGCS1-206ENST00000511774 GRIN2DO15399 1336 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms