RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
COL1A1-213ENST00000511732 DNM1LO00429 736 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 AAMPQ13685 434 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 KCTD2Q14681 263 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 GJC2Q5T442 439 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-213ENST00000511732 SLFN13Q68D06 897 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 KIFC2Q96AC6 838 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
COL1A1-213ENST00000511732 ANAPC4Q9UJX5 808 aa18.19■□□□□ 0.5
COL1A1-213ENST00000511732 DIS3Q9Y2L1 958 aaKnown RBP18.19■□□□□ 0.5
COL1A1-213ENST00000511732 ATP2A1O14983 1001 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 NMT2O60551 498 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 BMP3P12645 472 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 BMP8BP34820 402 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 COPB2P35606 906 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-213ENST00000511732 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 TINF2Q9BSI4 451 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 RWDD1Q9H446 243 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-213ENST00000511732 SLC38A10Q9HBR0 1119 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 FEM1BQ9UK73 627 aa18.18■□□□□ 0.5
COL1A1-213ENST00000511732 A0A1W2PPC1 479 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 SOX1O00570 391 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-213ENST00000511732 ZBED4O75132 1171 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 FGAP02671 866 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 FGRP09769 529 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 TAL1P17542 331 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-213ENST00000511732 MAGEA10P43363 369 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-213ENST00000511732 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-213ENST00000511732 NMIQ13287 307 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-213ENST00000511732 ALX1Q15699 326 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
COL1A1-213ENST00000511732 DNAJC25-GNG10A0A024R161 153 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-213ENST00000511732 CHD1LQ86WJ1 897 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 ARRDC4Q8NCT1 418 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
COL1A1-213ENST00000511732 TRIM6-TRIM34B2RNG4 842 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
COL1A1-213ENST00000511732 MCCP23508 829 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 NOVP48745 357 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 NUCB1Q02818 461 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 RILPL2Q969X0 211 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 GMCL1Q96IK5 515 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 ZNF536O15090 1300 aa18.15■□□□□ 0.5
COL1A1-213ENST00000511732 ORC4O43929 436 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 RANBP6O60518 1105 aaKnown RBP18.14■□□□□ 0.49
COL1A1-213ENST00000511732 SNAI1O95863 264 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-213ENST00000511732 SLC1A4P43007 532 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 LRRC41Q15345 812 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.14■□□□□ 0.49
COL1A1-213ENST00000511732 TICAM2Q86XR7 235 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 DDX11Q96FC9 970 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 LRCH3Q96II8 777 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 FGD4Q96M96 766 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
COL1A1-213ENST00000511732 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-213ENST00000511732 SDSP20132 328 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 STAT2P52630 851 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 OAZ1P54368 228 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 RTP1P59025 263 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 MAMDC4Q6UXC1 1216 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 STAG1Q8WVM7 1258 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 LENG1Q96BZ8 264 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-213ENST00000511732 CTDP1Q9Y5B0 961 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-213ENST00000511732 CCDC171Q6TFL3 1326 aa18.13■□□□□ 0.49
COL1A1-213ENST00000511732 MCM3APO60318 1980 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 KBTBD13C9JR72 458 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 HAND2P61296 217 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 MDM2Q00987 491 aaPredicted RBP18.12■□□□□ 0.49
COL1A1-213ENST00000511732 RRP12Q5JTH9 1297 aaKnown RBP18.12■□□□□ 0.49
COL1A1-213ENST00000511732 RCSD1Q6JBY9 416 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 CHST13Q8NET6 341 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 AGBL1Q96MI9 1066 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 XPNPEP3Q9NQH7 507 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 ISY1Q9ULR0 285 aaKnown RBP18.12■□□□□ 0.49
COL1A1-213ENST00000511732 ZMYM6O95789 1325 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 LAMA3Q16787 3333 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 LTBP2Q14767 1821 aa18.12■□□□□ 0.49
COL1A1-213ENST00000511732 PLA2G6O60733 806 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 PGK1P00558 417 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 RARBP10826 455 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 SNAP25P60880 206 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 SNX17Q15036 470 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 PPP4R3BQ5MIZ7 849 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 ANKRD35Q8N283 1001 aa18.11■□□□□ 0.49
COL1A1-213ENST00000511732 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
COL1A1-213ENST00000511732 CHURC1Q8WUH1 139 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms